Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CXCL5P42830 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL5P42830 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CXCL5P42830 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CXCL5P42830 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CXCL5P42830 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCL5P42830 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CXCL5P42830 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCL5P42830 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL5P42830 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.69□□□□□ -0.22
CXCL5P42830 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCL5P42830 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL5P42830 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL5P42830 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.69□□□□□ -0.22
CXCL5P42830 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CXCL5P42830 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CXCL5P42830 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.68□□□□□ -0.22
CXCL5P42830 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CXCL5P42830 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CXCL5P42830 AC092720.2-201ENST00000602388 1665 ntBASIC13.68□□□□□ -0.22
CXCL5P42830 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CXCL5P42830 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.68□□□□□ -0.22
CXCL5P42830 AL162377.1-201ENST00000618844 1793 ntBASIC13.68□□□□□ -0.22
CXCL5P42830 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL5P42830 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
CXCL5P42830 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL5P42830 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CXCL5P42830 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 AL356441.2-201ENST00000443009 864 ntBASIC13.67□□□□□ -0.22
CXCL5P42830 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.67□□□□□ -0.22
CXCL5P42830 AC053503.5-201ENST00000601508 636 ntBASIC13.67□□□□□ -0.22
CXCL5P42830 MIR4466-201ENST00000606121 54 ntBASIC13.67□□□□□ -0.22
CXCL5P42830 AC105233.4-201ENST00000642045 216 ntBASIC13.67□□□□□ -0.22
CXCL5P42830 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CXCL5P42830 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL5P42830 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CXCL5P42830 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL5P42830 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CXCL5P42830 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CXCL5P42830 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCL5P42830 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC13.66□□□□□ -0.22
CXCL5P42830 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CXCL5P42830 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CXCL5P42830 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL5P42830 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.66□□□□□ -0.22
CXCL5P42830 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCL5P42830 MIR4767-201ENST00000582827 78 ntBASIC13.66□□□□□ -0.22
CXCL5P42830 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms