Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.39■■□□□ 1.01
PCK1P35558 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCK1P35558 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PCK1P35558 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PCK1P35558 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
PCK1P35558 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
PCK1P35558 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 AC020907.5-201ENST00000624372 1936 ntBASIC21.38■■□□□ 1.01
PCK1P35558 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.38■■□□□ 1.01
PCK1P35558 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 AL162430.1-201ENST00000480705 870 ntBASIC21.38■■□□□ 1.01
PCK1P35558 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.38■■□□□ 1.01
PCK1P35558 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PCK1P35558 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.38■■□□□ 1.01
PCK1P35558 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PCK1P35558 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCK1P35558 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PCK1P35558 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.37■■□□□ 1.01
PCK1P35558 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
PCK1P35558 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCK1P35558 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.37■■□□□ 1.01
PCK1P35558 AC006015.1-201ENST00000429970 570 ntBASIC21.37■■□□□ 1.01
PCK1P35558 AC007322.4-201ENST00000509611 723 ntBASIC21.37■■□□□ 1.01
PCK1P35558 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.37■■□□□ 1.01
PCK1P35558 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCK1P35558 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.37■■□□□ 1.01
PCK1P35558 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.37■■□□□ 1.01
PCK1P35558 AL391422.3-201ENST00000603791 2761 ntBASIC21.37■■□□□ 1.01
PCK1P35558 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.37■■□□□ 1.01
PCK1P35558 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PCK1P35558 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.37■■□□□ 1.01
PCK1P35558 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.37■■□□□ 1.01
PCK1P35558 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCK1P35558 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.36■■□□□ 1.01
PCK1P35558 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.36■■□□□ 1.01
PCK1P35558 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.36■■□□□ 1.01
PCK1P35558 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.36■■□□□ 1.01
PCK1P35558 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 AL162412.1-201ENST00000567129 965 ntBASIC21.36■■□□□ 1.01
PCK1P35558 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCK1P35558 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 AL591742.1-201ENST00000604433 565 ntBASIC21.36■■□□□ 1.01
PCK1P35558 AC013268.1-206ENST00000638368 961 ntBASIC21.36■■□□□ 1.01
PCK1P35558 AC112229.1-201ENST00000639295 961 ntBASIC21.36■■□□□ 1.01
PCK1P35558 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.36■■□□□ 1.01
PCK1P35558 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PCK1P35558 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCK1P35558 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCK1P35558 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCK1P35558 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCK1P35558 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.35■■□□□ 1.01
PCK1P35558 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.35■■□□□ 1.01
PCK1P35558 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.35■■□□□ 1.01
PCK1P35558 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PCK1P35558 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCK1P35558 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCK1P35558 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.35■■□□□ 1.01
PCK1P35558 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
PCK1P35558 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.35■■□□□ 1.01
PCK1P35558 MFSD11-216ENST00000590393 1141 ntBASIC21.35■■□□□ 1.01
PCK1P35558 FAM21FP-204ENST00000608637 956 ntBASIC21.35■■□□□ 1.01
PCK1P35558 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCK1P35558 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCK1P35558 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.35■■□□□ 1.01
PCK1P35558 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCK1P35558 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCK1P35558 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCK1P35558 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.35■■□□□ 1.01
PCK1P35558 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
PCK1P35558 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCK1P35558 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PCK1P35558 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms