Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.82■□□□□ 0.6
NR4A1P22736 AL358852.1-201ENST00000623174 1268 ntBASIC18.82■□□□□ 0.6
NR4A1P22736 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.82■□□□□ 0.6
NR4A1P22736 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR4A1P22736 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR4A1P22736 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR4A1P22736 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR4A1P22736 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR4A1P22736 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR4A1P22736 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.82■□□□□ 0.6
NR4A1P22736 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NR4A1P22736 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.81■□□□□ 0.6
NR4A1P22736 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NR4A1P22736 AP000974.1-201ENST00000623909 2387 ntBASIC18.81■□□□□ 0.6
NR4A1P22736 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.81■□□□□ 0.6
NR4A1P22736 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.81■□□□□ 0.6
NR4A1P22736 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NR4A1P22736 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.81■□□□□ 0.6
NR4A1P22736 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.81■□□□□ 0.6
NR4A1P22736 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.81■□□□□ 0.6
NR4A1P22736 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.81■□□□□ 0.6
NR4A1P22736 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.81■□□□□ 0.6
NR4A1P22736 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.81■□□□□ 0.6
NR4A1P22736 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NR4A1P22736 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NR4A1P22736 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NR4A1P22736 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NR4A1P22736 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
NR4A1P22736 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NR4A1P22736 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
NR4A1P22736 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.8■□□□□ 0.6
NR4A1P22736 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NR4A1P22736 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.8■□□□□ 0.6
NR4A1P22736 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.8■□□□□ 0.6
NR4A1P22736 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 AC079089.2-201ENST00000531211 1277 ntBASIC18.8■□□□□ 0.6
NR4A1P22736 AL354811.1-201ENST00000610286 706 ntBASIC18.8■□□□□ 0.6
NR4A1P22736 LETM1P2-201ENST00000597330 2178 ntBASIC18.8■□□□□ 0.6
NR4A1P22736 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NR4A1P22736 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
NR4A1P22736 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NR4A1P22736 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.79■□□□□ 0.6
NR4A1P22736 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.79■□□□□ 0.6
NR4A1P22736 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.79■□□□□ 0.6
NR4A1P22736 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.79■□□□□ 0.6
NR4A1P22736 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NR4A1P22736 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NR4A1P22736 AC099778.1-201ENST00000568593 1911 ntBASIC18.78■□□□□ 0.6
NR4A1P22736 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR4A1P22736 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR4A1P22736 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NR4A1P22736 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.78■□□□□ 0.6
NR4A1P22736 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NR4A1P22736 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.78■□□□□ 0.6
NR4A1P22736 OR7E47P-201ENST00000546390 1422 ntBASIC18.78■□□□□ 0.6
NR4A1P22736 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NR4A1P22736 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms