Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CAPNS1P04632 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CAPNS1P04632 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.23■□□□□ 0.83
CAPNS1P04632 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CAPNS1P04632 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CAPNS1P04632 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.23■□□□□ 0.83
CAPNS1P04632 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPNS1P04632 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPNS1P04632 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.23■□□□□ 0.83
CAPNS1P04632 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CAPNS1P04632 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.23■□□□□ 0.83
CAPNS1P04632 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CAPNS1P04632 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.23■□□□□ 0.83
CAPNS1P04632 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPNS1P04632 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CAPNS1P04632 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPNS1P04632 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPNS1P04632 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CAPNS1P04632 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CAPNS1P04632 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.22■□□□□ 0.83
CAPNS1P04632 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 AC010980.2-201ENST00000587099 1412 ntBASIC20.22■□□□□ 0.83
CAPNS1P04632 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPNS1P04632 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.22■□□□□ 0.83
CAPNS1P04632 RPPH1-201ENST00000516869 333 ntBASIC20.22■□□□□ 0.83
CAPNS1P04632 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.22■□□□□ 0.83
CAPNS1P04632 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPNS1P04632 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CAPNS1P04632 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CAPNS1P04632 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPNS1P04632 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPNS1P04632 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPNS1P04632 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CAPNS1P04632 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.21■□□□□ 0.83
CAPNS1P04632 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CAPNS1P04632 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPNS1P04632 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPNS1P04632 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPNS1P04632 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.21■□□□□ 0.83
CAPNS1P04632 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPNS1P04632 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CAPNS1P04632 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.21■□□□□ 0.83
CAPNS1P04632 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CAPNS1P04632 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.21■□□□□ 0.83
CAPNS1P04632 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPNS1P04632 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPNS1P04632 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CAPNS1P04632 SNORA78-201ENST00000459373 127 ntBASIC20.21■□□□□ 0.83
CAPNS1P04632 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPNS1P04632 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CAPNS1P04632 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
CAPNS1P04632 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPNS1P04632 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CAPNS1P04632 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.2■□□□□ 0.82
CAPNS1P04632 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.2■□□□□ 0.82
CAPNS1P04632 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CAPNS1P04632 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.2■□□□□ 0.82
CAPNS1P04632 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CAPNS1P04632 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPNS1P04632 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPNS1P04632 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPNS1P04632 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPNS1P04632 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPNS1P04632 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPNS1P04632 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPNS1P04632 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPNS1P04632 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPNS1P04632 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.19■□□□□ 0.82
CAPNS1P04632 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.19■□□□□ 0.82
CAPNS1P04632 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.19■□□□□ 0.82
CAPNS1P04632 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.19■□□□□ 0.82
CAPNS1P04632 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.19■□□□□ 0.82
CAPNS1P04632 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CAPNS1P04632 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CAPNS1P04632 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPNS1P04632 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CAPNS1P04632 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms