Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN1O95832 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.19■□□□□ 0.5
CLDN1O95832 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN1O95832 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN1O95832 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN1O95832 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN1O95832 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN1O95832 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLDN1O95832 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN1O95832 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLDN1O95832 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLDN1O95832 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN1O95832 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN1O95832 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN1O95832 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN1O95832 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN1O95832 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN1O95832 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN1O95832 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN1O95832 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN1O95832 AC110285.5-201ENST00000611501 352 ntBASIC18.18■□□□□ 0.5
CLDN1O95832 AC092865.7-201ENST00000641832 219 ntBASIC18.18■□□□□ 0.5
CLDN1O95832 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLDN1O95832 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN1O95832 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN1O95832 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN1O95832 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN1O95832 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CLDN1O95832 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.17■□□□□ 0.5
CLDN1O95832 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.17■□□□□ 0.5
CLDN1O95832 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLDN1O95832 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLDN1O95832 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLDN1O95832 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.17■□□□□ 0.5
CLDN1O95832 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CLDN1O95832 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLDN1O95832 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLDN1O95832 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLDN1O95832 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CLDN1O95832 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CLDN1O95832 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN1O95832 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN1O95832 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN1O95832 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN1O95832 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN1O95832 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLDN1O95832 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN1O95832 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN1O95832 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN1O95832 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN1O95832 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN1O95832 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.16■□□□□ 0.5
CLDN1O95832 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.16■□□□□ 0.5
CLDN1O95832 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDN1O95832 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CLDN1O95832 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN1O95832 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDN1O95832 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN1O95832 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDN1O95832 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN1O95832 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLDN1O95832 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN1O95832 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN1O95832 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms