Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX3O60493 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX3O60493 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX3O60493 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX3O60493 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX3O60493 AP005435.1-201ENST00000529293 1178 ntBASIC20.06■□□□□ 0.8
SNX3O60493 KRT125P-201ENST00000546827 989 ntBASIC20.06■□□□□ 0.8
SNX3O60493 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.06■□□□□ 0.8
SNX3O60493 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.06■□□□□ 0.8
SNX3O60493 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX3O60493 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNX3O60493 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX3O60493 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNX3O60493 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.05■□□□□ 0.8
SNX3O60493 AL691432.2-201ENST00000607222 2038 ntBASIC20.05■□□□□ 0.8
SNX3O60493 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX3O60493 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SNX3O60493 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX3O60493 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SNX3O60493 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SNX3O60493 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SNX3O60493 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
SNX3O60493 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.05■□□□□ 0.8
SNX3O60493 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX3O60493 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.05■□□□□ 0.8
SNX3O60493 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SNX3O60493 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNX3O60493 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX3O60493 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SNX3O60493 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.04■□□□□ 0.8
SNX3O60493 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX3O60493 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX3O60493 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX3O60493 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX3O60493 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX3O60493 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.04■□□□□ 0.8
SNX3O60493 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SNX3O60493 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.04■□□□□ 0.8
SNX3O60493 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNX3O60493 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.04■□□□□ 0.8
SNX3O60493 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNX3O60493 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.03■□□□□ 0.8
SNX3O60493 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX3O60493 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SNX3O60493 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
SNX3O60493 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.03■□□□□ 0.8
SNX3O60493 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.03■□□□□ 0.8
SNX3O60493 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
SNX3O60493 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX3O60493 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX3O60493 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX3O60493 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX3O60493 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SNX3O60493 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX3O60493 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX3O60493 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX3O60493 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX3O60493 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SNX3O60493 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SNX3O60493 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX3O60493 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.02■□□□□ 0.8
SNX3O60493 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX3O60493 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SNX3O60493 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.02■□□□□ 0.8
SNX3O60493 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX3O60493 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.02■□□□□ 0.8
SNX3O60493 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX3O60493 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX3O60493 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX3O60493 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNX3O60493 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.02■□□□□ 0.8
SNX3O60493 MIR4787-201ENST00000607364 84 ntBASIC20.02■□□□□ 0.8
SNX3O60493 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNX3O60493 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.02■□□□□ 0.8
SNX3O60493 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX3O60493 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SNX3O60493 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SNX3O60493 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNX3O60493 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SNX3O60493 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX3O60493 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SNX3O60493 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX3O60493 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SNX3O60493 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms