Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSSCA1O60232 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSSCA1O60232 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSSCA1O60232 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.58■□□□□ 0.24
SSSCA1O60232 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSSCA1O60232 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SSSCA1O60232 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSSCA1O60232 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SSSCA1O60232 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SSSCA1O60232 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSSCA1O60232 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSSCA1O60232 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSSCA1O60232 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SSSCA1O60232 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSSCA1O60232 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSSCA1O60232 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.57■□□□□ 0.24
SSSCA1O60232 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.57■□□□□ 0.24
SSSCA1O60232 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.57■□□□□ 0.24
SSSCA1O60232 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.57■□□□□ 0.24
SSSCA1O60232 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.57■□□□□ 0.24
SSSCA1O60232 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSSCA1O60232 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.57■□□□□ 0.24
SSSCA1O60232 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSSCA1O60232 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.56■□□□□ 0.24
SSSCA1O60232 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SSSCA1O60232 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SSSCA1O60232 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SSSCA1O60232 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 AP000974.1-201ENST00000623909 2387 ntBASIC16.56■□□□□ 0.24
SSSCA1O60232 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.56■□□□□ 0.24
SSSCA1O60232 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.56■□□□□ 0.24
SSSCA1O60232 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.56■□□□□ 0.24
SSSCA1O60232 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SSSCA1O60232 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SSSCA1O60232 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSSCA1O60232 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 AC125437.2-201ENST00000625180 2167 ntBASIC16.55■□□□□ 0.24
SSSCA1O60232 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.55■□□□□ 0.24
SSSCA1O60232 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.55■□□□□ 0.24
SSSCA1O60232 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.55■□□□□ 0.24
SSSCA1O60232 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 RARRES2P1-201ENST00000474487 481 ntBASIC16.55■□□□□ 0.24
SSSCA1O60232 MIR3621-201ENST00000580529 85 ntBASIC16.55■□□□□ 0.24
SSSCA1O60232 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
SSSCA1O60232 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.55■□□□□ 0.24
SSSCA1O60232 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SSSCA1O60232 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSSCA1O60232 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 AC009237.3-201ENST00000393279 1427 ntBASIC16.54■□□□□ 0.24
SSSCA1O60232 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SSSCA1O60232 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SSSCA1O60232 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.54■□□□□ 0.24
SSSCA1O60232 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.54■□□□□ 0.24
SSSCA1O60232 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.54■□□□□ 0.24
SSSCA1O60232 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SSSCA1O60232 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.54■□□□□ 0.24
SSSCA1O60232 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSSCA1O60232 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms