Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLOCKO15516 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.27■□□□□ 0.68
CLOCKO15516 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLOCKO15516 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLOCKO15516 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CLOCKO15516 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLOCKO15516 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLOCKO15516 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.26■□□□□ 0.67
CLOCKO15516 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLOCKO15516 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLOCKO15516 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLOCKO15516 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLOCKO15516 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLOCKO15516 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLOCKO15516 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CLOCKO15516 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.26■□□□□ 0.67
CLOCKO15516 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.26■□□□□ 0.67
CLOCKO15516 MIR6821-201ENST00000617625 74 ntBASIC19.26■□□□□ 0.67
CLOCKO15516 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLOCKO15516 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLOCKO15516 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLOCKO15516 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLOCKO15516 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLOCKO15516 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLOCKO15516 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CLOCKO15516 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLOCKO15516 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLOCKO15516 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLOCKO15516 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLOCKO15516 AC098818.2-201ENST00000564925 2320 ntBASIC19.25■□□□□ 0.67
CLOCKO15516 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.25■□□□□ 0.67
CLOCKO15516 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLOCKO15516 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLOCKO15516 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLOCKO15516 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLOCKO15516 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.25■□□□□ 0.67
CLOCKO15516 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.25■□□□□ 0.67
CLOCKO15516 AC097381.1-201ENST00000429019 1296 ntBASIC19.25■□□□□ 0.67
CLOCKO15516 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.25■□□□□ 0.67
CLOCKO15516 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.25■□□□□ 0.67
CLOCKO15516 AC087623.3-201ENST00000607047 1098 ntBASIC19.25■□□□□ 0.67
CLOCKO15516 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLOCKO15516 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLOCKO15516 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLOCKO15516 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.25■□□□□ 0.67
CLOCKO15516 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.24■□□□□ 0.67
CLOCKO15516 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLOCKO15516 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLOCKO15516 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLOCKO15516 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLOCKO15516 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLOCKO15516 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.24■□□□□ 0.67
CLOCKO15516 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CLOCKO15516 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLOCKO15516 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLOCKO15516 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLOCKO15516 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLOCKO15516 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLOCKO15516 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLOCKO15516 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.23■□□□□ 0.67
CLOCKO15516 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.23■□□□□ 0.67
CLOCKO15516 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.23■□□□□ 0.67
CLOCKO15516 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.23■□□□□ 0.67
CLOCKO15516 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.23■□□□□ 0.67
CLOCKO15516 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.23■□□□□ 0.67
CLOCKO15516 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.23■□□□□ 0.67
CLOCKO15516 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLOCKO15516 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.23■□□□□ 0.67
CLOCKO15516 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLOCKO15516 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLOCKO15516 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.22■□□□□ 0.67
CLOCKO15516 AC116562.4-201ENST00000641316 2276 ntBASIC19.22■□□□□ 0.67
CLOCKO15516 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.22■□□□□ 0.67
CLOCKO15516 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLOCKO15516 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLOCKO15516 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLOCKO15516 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CLOCKO15516 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.22■□□□□ 0.67
CLOCKO15516 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.22■□□□□ 0.67
CLOCKO15516 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLOCKO15516 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLOCKO15516 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLOCKO15516 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLOCKO15516 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms