Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN9O14815 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN9O14815 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.46■■□□□ 1.03
CAPN9O14815 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN9O14815 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN9O14815 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CAPN9O14815 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN9O14815 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN9O14815 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN9O14815 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN9O14815 MKRN4P-201ENST00000444706 1521 ntBASIC21.45■■□□□ 1.02
CAPN9O14815 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN9O14815 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN9O14815 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.45■■□□□ 1.02
CAPN9O14815 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN9O14815 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CAPN9O14815 SLC29A4P1-201ENST00000398760 971 ntBASIC21.45■■□□□ 1.02
CAPN9O14815 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.45■■□□□ 1.02
CAPN9O14815 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.45■■□□□ 1.02
CAPN9O14815 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.45■■□□□ 1.02
CAPN9O14815 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN9O14815 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.45■■□□□ 1.02
CAPN9O14815 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CAPN9O14815 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN9O14815 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN9O14815 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.45■■□□□ 1.02
CAPN9O14815 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.45■■□□□ 1.02
CAPN9O14815 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN9O14815 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.45■■□□□ 1.02
CAPN9O14815 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN9O14815 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN9O14815 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CAPN9O14815 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN9O14815 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CAPN9O14815 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN9O14815 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN9O14815 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.44■■□□□ 1.02
CAPN9O14815 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN9O14815 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.44■■□□□ 1.02
CAPN9O14815 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.44■■□□□ 1.02
CAPN9O14815 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CAPN9O14815 AC100791.3-201ENST00000617619 330 ntBASIC21.44■■□□□ 1.02
CAPN9O14815 AL109923.1-201ENST00000618799 583 ntBASIC21.44■■□□□ 1.02
CAPN9O14815 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN9O14815 AC010980.2-201ENST00000587099 1412 ntBASIC21.44■■□□□ 1.02
CAPN9O14815 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN9O14815 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.44■■□□□ 1.02
CAPN9O14815 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN9O14815 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN9O14815 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN9O14815 AC027702.1-201ENST00000563810 1770 ntBASIC21.43■■□□□ 1.02
CAPN9O14815 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CAPN9O14815 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.43■■□□□ 1.02
CAPN9O14815 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN9O14815 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN9O14815 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN9O14815 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CAPN9O14815 MCRIP2P1-201ENST00000394346 511 ntBASIC21.43■■□□□ 1.02
CAPN9O14815 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN9O14815 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
CAPN9O14815 CYP21A1P-202ENST00000354927 1481 ntBASIC21.43■■□□□ 1.02
CAPN9O14815 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CAPN9O14815 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.43■■□□□ 1.02
CAPN9O14815 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.43■■□□□ 1.02
CAPN9O14815 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN9O14815 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN9O14815 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN9O14815 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.43■■□□□ 1.02
CAPN9O14815 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN9O14815 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN9O14815 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CAPN9O14815 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN9O14815 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CAPN9O14815 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN9O14815 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN9O14815 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
CAPN9O14815 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN9O14815 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN9O14815 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.42■■□□□ 1.02
CAPN9O14815 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CAPN9O14815 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN9O14815 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.42■■□□□ 1.02
CAPN9O14815 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.42■■□□□ 1.02
CAPN9O14815 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CAPN9O14815 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CAPN9O14815 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN9O14815 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.42■■□□□ 1.02
CAPN9O14815 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN9O14815 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.42■■□□□ 1.02
CAPN9O14815 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN9O14815 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.42■■□□□ 1.02
CAPN9O14815 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.42■■□□□ 1.02
CAPN9O14815 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.42■■□□□ 1.02
CAPN9O14815 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN9O14815 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CAPN9O14815 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN9O14815 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CAPN9O14815 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.41■■□□□ 1.02
CAPN9O14815 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN9O14815 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms