Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAFD1O14545 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
TRAFD1O14545 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAFD1O14545 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAFD1O14545 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAFD1O14545 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRAFD1O14545 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAFD1O14545 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.85■□□□□ 0.93
TRAFD1O14545 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAFD1O14545 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAFD1O14545 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.85■□□□□ 0.93
TRAFD1O14545 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.85■□□□□ 0.93
TRAFD1O14545 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAFD1O14545 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAFD1O14545 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAFD1O14545 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAFD1O14545 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAFD1O14545 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.85■□□□□ 0.93
TRAFD1O14545 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAFD1O14545 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.85■□□□□ 0.93
TRAFD1O14545 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAFD1O14545 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAFD1O14545 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAFD1O14545 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.84■□□□□ 0.93
TRAFD1O14545 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAFD1O14545 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAFD1O14545 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRAFD1O14545 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.84■□□□□ 0.93
TRAFD1O14545 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.84■□□□□ 0.93
TRAFD1O14545 RARRES2P4-201ENST00000514074 484 ntBASIC20.84■□□□□ 0.93
TRAFD1O14545 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAFD1O14545 FAM21FP-204ENST00000608637 956 ntBASIC20.84■□□□□ 0.93
TRAFD1O14545 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAFD1O14545 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAFD1O14545 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAFD1O14545 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAFD1O14545 AC116050.2-201ENST00000612102 1779 ntBASIC20.84■□□□□ 0.93
TRAFD1O14545 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAFD1O14545 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAFD1O14545 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAFD1O14545 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAFD1O14545 GABARAPL3-202ENST00000624044 1851 ntBASIC20.84■□□□□ 0.93
TRAFD1O14545 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAFD1O14545 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TRAFD1O14545 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAFD1O14545 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAFD1O14545 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.83■□□□□ 0.93
TRAFD1O14545 CDV3P1-201ENST00000471403 739 ntBASIC20.83■□□□□ 0.93
TRAFD1O14545 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAFD1O14545 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAFD1O14545 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAFD1O14545 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.83■□□□□ 0.93
TRAFD1O14545 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAFD1O14545 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRAFD1O14545 OR10C1-204ENST00000622521 1039 ntBASIC20.83■□□□□ 0.93
TRAFD1O14545 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAFD1O14545 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TRAFD1O14545 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAFD1O14545 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAFD1O14545 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.83■□□□□ 0.92
TRAFD1O14545 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TRAFD1O14545 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAFD1O14545 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.83■□□□□ 0.92
TRAFD1O14545 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAFD1O14545 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAFD1O14545 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAFD1O14545 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAFD1O14545 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAFD1O14545 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAFD1O14545 AC007322.3-201ENST00000426526 701 ntBASIC20.82■□□□□ 0.92
TRAFD1O14545 AC083906.2-201ENST00000511578 360 ntBASIC20.82■□□□□ 0.92
TRAFD1O14545 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAFD1O14545 AL121832.2-201ENST00000610979 668 ntBASIC20.82■□□□□ 0.92
TRAFD1O14545 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.82■□□□□ 0.92
TRAFD1O14545 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAFD1O14545 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAFD1O14545 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAFD1O14545 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAFD1O14545 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRAFD1O14545 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAFD1O14545 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
TRAFD1O14545 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAFD1O14545 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAFD1O14545 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAFD1O14545 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAFD1O14545 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAFD1O14545 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAFD1O14545 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAFD1O14545 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAFD1O14545 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAFD1O14545 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAFD1O14545 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAFD1O14545 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAFD1O14545 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRAFD1O14545 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.81■□□□□ 0.92
TRAFD1O14545 AC069236.1-201ENST00000604339 616 ntBASIC20.81■□□□□ 0.92
TRAFD1O14545 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAFD1O14545 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAFD1O14545 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRAFD1O14545 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms