Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 AP001412.1-201ENST00000608405 714 ntBASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 AC244015.2-201ENST00000616358 1861 ntBASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAV17A0A0B4J275 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 AC110285.5-201ENST00000611501 352 ntBASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV17A0A0B4J275 AL135905.2-201ENST00000584934 1404 ntBASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 PRKY-204ENST00000533551 1019 ntBASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 AC233702.5-201ENST00000584107 538 ntBASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV17A0A0B4J275 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 KRASP1-201ENST00000407852 552 ntBASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV17A0A0B4J275 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 RPS2P55-201ENST00000397318 883 ntBASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 AC107956.1-201ENST00000494359 873 ntBASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 AC073912.3-201ENST00000624414 853 ntBASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV17A0A0B4J275 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms