Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 DUX4L18-201ENST00000553347 1267 ntBASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV12-1A0A0B4J245 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-1A0A0B4J245 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 OR2I1P-207ENST00000453522 948 ntBASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 MIR4449-201ENST00000578365 66 ntBASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 AIRN-201ENST00000601203 4374 ntBASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRAV12-1A0A0B4J245 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 BX005040.4-201ENST00000637145 1518 ntBASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 AC079598.2-202ENST00000546624 1451 ntBASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-1A0A0B4J245 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 MIR4508-201ENST00000584178 70 ntBASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-1A0A0B4J245 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms