Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
NCDNQ9UBB6 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
NCDNQ9UBB6 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
NCDNQ9UBB6 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
NCDNQ9UBB6 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
NCDNQ9UBB6 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC8.84□□□□□ -0.99
NCDNQ9UBB6 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
NCDNQ9UBB6 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC8.84□□□□□ -1
NCDNQ9UBB6 DMP1-201ENST00000282479 2634 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
NCDNQ9UBB6 MFSD8-259ENST00000642042 2303 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 AC022486.1-201ENST00000510613 1483 ntTSL 5 BASIC8.83□□□□□ -1
NCDNQ9UBB6 ZNF366-201ENST00000318442 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 NIP7-202ENST00000254941 1887 ntTSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 PCDH15-223ENST00000495484 1896 ntTSL 5 BASIC8.83□□□□□ -1
NCDNQ9UBB6 AC007238.1-201ENST00000434096 1741 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 CNEP1R1-206ENST00000565556 1707 ntTSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 STRADA-230ENST00000638702 2140 ntTSL 5 BASIC8.83□□□□□ -1
NCDNQ9UBB6 C11orf45-201ENST00000310799 3624 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 CLDN2-202ENST00000540876 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.83□□□□□ -1
NCDNQ9UBB6 ZBTB20-203ENST00000462705 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 BRCC3-206ENST00000399042 954 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
NCDNQ9UBB6 RBMY2JP-201ENST00000425544 1059 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 FAR2P3-205ENST00000447059 604 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 SETP4-201ENST00000455717 868 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC8.83□□□□□ -1
NCDNQ9UBB6 AC002384.1-202ENST00000470135 673 ntTSL 5 BASIC8.83□□□□□ -1
NCDNQ9UBB6 RN7SL241P-201ENST00000482973 236 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 RN7SL598P-201ENST00000494391 294 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 CASC16-201ENST00000510238 955 ntTSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC8.83□□□□□ -1
NCDNQ9UBB6 MTND6P20-201ENST00000522986 418 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC8.83□□□□□ -1
NCDNQ9UBB6 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC8.83□□□□□ -1
NCDNQ9UBB6 AC103949.1-201ENST00000582064 457 ntTSL 3 BASIC8.83□□□□□ -1
NCDNQ9UBB6 AC083798.2-203ENST00000608346 564 ntTSL 2 BASIC8.83□□□□□ -1
NCDNQ9UBB6 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 AL356095.2-201ENST00000624025 457 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 BRCC3-210ENST00000630295 954 ntTSL 5 BASIC8.83□□□□□ -1
NCDNQ9UBB6 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC8.83□□□□□ -1
NCDNQ9UBB6 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 ANKRD55-202ENST00000434982 1518 ntTSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC8.83□□□□□ -1
NCDNQ9UBB6 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 FAM71B-201ENST00000302938 2515 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 SLC30A8-202ENST00000456015 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 CD200-201ENST00000315711 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 UVSSA-201ENST00000324803 4441 ntBASIC8.83□□□□□ -1
NCDNQ9UBB6 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
NCDNQ9UBB6 LINC00933-201ENST00000557887 2606 ntTSL 2 BASIC8.83□□□□□ -1
NCDNQ9UBB6 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.83□□□□□ -1
NCDNQ9UBB6 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 TUBBP10-201ENST00000427668 1301 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 TMEM241-201ENST00000383233 2934 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 RCAN1-204ENST00000399272 2164 ntTSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 GNGT1-205ENST00000455502 1943 ntTSL 2 BASIC8.82□□□□□ -1
NCDNQ9UBB6 AC020604.1-201ENST00000622979 1909 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 MDH1-215ENST00000539945 1443 ntTSL 2 BASIC8.82□□□□□ -1
NCDNQ9UBB6 EXD2-203ENST00000409018 3252 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 AL590426.1-201ENST00000440811 2285 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
NCDNQ9UBB6 NBPF25P-201ENST00000606775 2019 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 WDR36-204ENST00000513710 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC8.82□□□□□ -1
NCDNQ9UBB6 AC091825.1-201ENST00000622952 2621 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 SPRR3-201ENST00000295367 878 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 SIRPG-203ENST00000344103 1042 ntTSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 RN7SKP257-201ENST00000364525 309 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 MIR128-2-201ENST00000384893 84 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 MIR301B-201ENST00000390813 78 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 U3.38-201ENST00000408534 216 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC8.82□□□□□ -1
NCDNQ9UBB6 RNA5SP231-201ENST00000410496 138 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC8.82□□□□□ -1
NCDNQ9UBB6 KIF9-203ENST00000425452 640 ntTSL 3 BASIC8.82□□□□□ -1
NCDNQ9UBB6 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC8.82□□□□□ -1
NCDNQ9UBB6 AC092431.2-201ENST00000441658 318 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 PCMTD1P3-201ENST00000451824 472 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 PSMD6-AS1-201ENST00000462717 441 ntTSL 3 BASIC8.82□□□□□ -1
NCDNQ9UBB6 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC8.82□□□□□ -1
NCDNQ9UBB6 GAPDHP35-201ENST00000513369 976 ntBASIC8.82□□□□□ -1
NCDNQ9UBB6 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC8.82□□□□□ -1
NCDNQ9UBB6 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC8.82□□□□□ -1
NCDNQ9UBB6 TMEM185AP1-201ENST00000524311 546 ntBASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms