RNA–Protein interactions for RNA: ENST00000434982.2

ANKRD55-202, Transcript of ankyrin repeat domain 55, humanhuman

TSL 1 (best) BASIC

Gene ANKRD55, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55-202ENST00000434982 AEBP2Q6ZN18 517 aaPredicted RBP24.33■■□□□ 1.49
ANKRD55-202ENST00000434982 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
ANKRD55-202ENST00000434982 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1
ANKRD55-202ENST00000434982 NISCHQ9Y2I1 1504 aa20.52■□□□□ 0.88
ANKRD55-202ENST00000434982 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
ANKRD55-202ENST00000434982 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
ANKRD55-202ENST00000434982 FOXD1Q16676 465 aa19.01■□□□□ 0.63
ANKRD55-202ENST00000434982 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
ANKRD55-202ENST00000434982 ADRA2BP18089 450 aa18.63■□□□□ 0.57
ANKRD55-202ENST00000434982 CCDC180Q9P1Z9 1646 aa18.3■□□□□ 0.52
ANKRD55-202ENST00000434982 ABCC9O60706 1549 aa18.25■□□□□ 0.51
ANKRD55-202ENST00000434982 PIAS4Q8N2W9 510 aaPredicted RBP17.97■□□□□ 0.47
ANKRD55-202ENST00000434982 KCNA4P22459 653 aa17.6■□□□□ 0.41
ANKRD55-202ENST00000434982 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
ANKRD55-202ENST00000434982 RB1CC1Q8TDY2 1594 aa17.38■□□□□ 0.37
ANKRD55-202ENST00000434982 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
ANKRD55-202ENST00000434982 NACADO15069 1562 aa17.29■□□□□ 0.36
ANKRD55-202ENST00000434982 MSH5O43196 834 aa17.28■□□□□ 0.36
ANKRD55-202ENST00000434982 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
ANKRD55-202ENST00000434982 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
ANKRD55-202ENST00000434982 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
ANKRD55-202ENST00000434982 ZCCHC6Q5VYS8 1495 aaKnown RBP17.03■□□□□ 0.32
ANKRD55-202ENST00000434982 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
ANKRD55-202ENST00000434982 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
ANKRD55-202ENST00000434982 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
ANKRD55-202ENST00000434982 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
ANKRD55-202ENST00000434982 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
ANKRD55-202ENST00000434982 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
ANKRD55-202ENST00000434982 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
ANKRD55-202ENST00000434982 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
ANKRD55-202ENST00000434982 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
ANKRD55-202ENST00000434982 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
ANKRD55-202ENST00000434982 SCRIBQ14160 1630 aa16.77■□□□□ 0.27
ANKRD55-202ENST00000434982 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
ANKRD55-202ENST00000434982 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
ANKRD55-202ENST00000434982 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
ANKRD55-202ENST00000434982 EIF4G1Q04637 1599 aaKnown RBP16.46■□□□□ 0.23
ANKRD55-202ENST00000434982 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
ANKRD55-202ENST00000434982 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
ANKRD55-202ENST00000434982 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
ANKRD55-202ENST00000434982 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
ANKRD55-202ENST00000434982 ZBTB22O15209 634 aa16.25■□□□□ 0.19
ANKRD55-202ENST00000434982 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
ANKRD55-202ENST00000434982 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
ANKRD55-202ENST00000434982 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
ANKRD55-202ENST00000434982 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.15
ANKRD55-202ENST00000434982 BAZ1AQ9NRL2 1556 aaPredicted RBP15.91■□□□□ 0.14
ANKRD55-202ENST00000434982 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
ANKRD55-202ENST00000434982 SMARCA2P51531 1590 aa15.9■□□□□ 0.14
ANKRD55-202ENST00000434982 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
ANKRD55-202ENST00000434982 MROH2BQ7Z745 1585 aa15.84■□□□□ 0.13
ANKRD55-202ENST00000434982 BAZ1BQ9UIG0 1483 aaKnown RBP15.82■□□□□ 0.12
ANKRD55-202ENST00000434982 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
ANKRD55-202ENST00000434982 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
ANKRD55-202ENST00000434982 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
ANKRD55-202ENST00000434982 NESP48681 1621 aa15.72■□□□□ 0.11
ANKRD55-202ENST00000434982 WIZO95785 1651 aa15.67■□□□□ 0.1
ANKRD55-202ENST00000434982 CUX2O14529 1486 aa15.6■□□□□ 0.09
ANKRD55-202ENST00000434982 DCAF8L1A6NGE4 600 aa15.6■□□□□ 0.09
ANKRD55-202ENST00000434982 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.09
ANKRD55-202ENST00000434982 LAMC3Q9Y6N6 1575 aa15.57■□□□□ 0.08
ANKRD55-202ENST00000434982 RSF1Q96T23 1441 aaPredicted RBP15.57■□□□□ 0.08
ANKRD55-202ENST00000434982 CADPSQ9ULU8 1353 aa15.51■□□□□ 0.07
ANKRD55-202ENST00000434982 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
ANKRD55-202ENST00000434982 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
ANKRD55-202ENST00000434982 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
ANKRD55-202ENST00000434982 DNAJC5Q9H3Z4 198 aa15.46■□□□□ 0.07
ANKRD55-202ENST00000434982 TOP2AP11388 1531 aaKnown RBP15.45■□□□□ 0.06
ANKRD55-202ENST00000434982 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
ANKRD55-202ENST00000434982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.06
ANKRD55-202ENST00000434982 MRC2Q9UBG0 1479 aa15.36■□□□□ 0.05
ANKRD55-202ENST00000434982 CFTRP13569 1480 aa15.35■□□□□ 0.05
ANKRD55-202ENST00000434982 FANCD2Q9BXW9 1451 aa15.34■□□□□ 0.05
ANKRD55-202ENST00000434982 CEP164Q9UPV0 1460 aa15.34■□□□□ 0.05
ANKRD55-202ENST00000434982 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
ANKRD55-202ENST00000434982 CCDC88BA6NC98 1476 aa15.31■□□□□ 0.04
ANKRD55-202ENST00000434982 WDR62O43379 1518 aa15.3■□□□□ 0.04
ANKRD55-202ENST00000434982 ATF5Q9Y2D1 282 aaPredicted RBP15.22■□□□□ 0.03
ANKRD55-202ENST00000434982 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
ANKRD55-202ENST00000434982 PRDM2Q13029 1718 aa15.18■□□□□ 0.02
ANKRD55-202ENST00000434982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
ANKRD55-202ENST00000434982 HNRNPUL2Q1KMD3 747 aaKnown RBP15.18■□□□□ 0.02
ANKRD55-202ENST00000434982 SAMD1Q6SPF0 538 aaPredicted RBP15.17■□□□□ 0.02
ANKRD55-202ENST00000434982 SUPT5HO00267 1087 aaKnown RBP15.07■□□□□ 0
ANKRD55-202ENST00000434982 TOPBP1Q92547 1522 aa15.06■□□□□ 0
ANKRD55-202ENST00000434982 IFT140Q96RY7 1462 aa15.02□□□□□ -0.01
ANKRD55-202ENST00000434982 ZNF608Q9ULD9 1512 aaPredicted RBP15.01□□□□□ -0.01
ANKRD55-202ENST00000434982 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
ANKRD55-202ENST00000434982 DNMBPQ6XZF7 1577 aa15.01□□□□□ -0.01
ANKRD55-202ENST00000434982 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
ANKRD55-202ENST00000434982 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
ANKRD55-202ENST00000434982 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
ANKRD55-202ENST00000434982 AQRO60306 1485 aaKnown RBP eCLIP14.91□□□□□ -0.02
ANKRD55-202ENST00000434982 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
ANKRD55-202ENST00000434982 TARBP1Q13395 1621 aaKnown RBP14.9□□□□□ -0.02
ANKRD55-202ENST00000434982 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
ANKRD55-202ENST00000434982 RAD54L2Q9Y4B4 1467 aa14.9□□□□□ -0.02
ANKRD55-202ENST00000434982 APLP2Q06481 763 aa14.88□□□□□ -0.03
ANKRD55-202ENST00000434982 SOGA1O94964 1423 aa14.87□□□□□ -0.03
ANKRD55-202ENST00000434982 CUX1P39880 1505 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms