RNA–Protein interactions for RNA: ENST00000302938.4

FAM71B-201, Transcript of family with sequence similarity 71 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM71B, Length 2,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM71B-201ENST00000302938 NISCHQ9Y2I1 1504 aa20.76■□□□□ 0.91
FAM71B-201ENST00000302938 CCDC180Q9P1Z9 1646 aa18.06■□□□□ 0.48
FAM71B-201ENST00000302938 ABCC9O60706 1549 aa17.56■□□□□ 0.4
FAM71B-201ENST00000302938 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
FAM71B-201ENST00000302938 ZCCHC6Q5VYS8 1495 aaKnown RBP17.35■□□□□ 0.37
FAM71B-201ENST00000302938 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
FAM71B-201ENST00000302938 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
FAM71B-201ENST00000302938 NACADO15069 1562 aa16.97■□□□□ 0.31
FAM71B-201ENST00000302938 SHROOM4Q9ULL8 1493 aa16.95■□□□□ 0.3
FAM71B-201ENST00000302938 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
FAM71B-201ENST00000302938 RB1CC1Q8TDY2 1594 aa16.89■□□□□ 0.29
FAM71B-201ENST00000302938 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
FAM71B-201ENST00000302938 MYT1Q01538 1121 aa16.71■□□□□ 0.27
FAM71B-201ENST00000302938 HRCP23327 699 aa16.68■□□□□ 0.26
FAM71B-201ENST00000302938 PABPN1Q86U42 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
FAM71B-201ENST00000302938 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
FAM71B-201ENST00000302938 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
FAM71B-201ENST00000302938 PPARGC1BQ86YN6 1023 aaKnown RBP16.34■□□□□ 0.21
FAM71B-201ENST00000302938 CECR2Q9BXF3 1484 aa16.25■□□□□ 0.19
FAM71B-201ENST00000302938 SCAF1Q9H7N4 1312 aaKnown RBP16.24■□□□□ 0.19
FAM71B-201ENST00000302938 SUPT5HO00267 1087 aaKnown RBP16.21■□□□□ 0.19
FAM71B-201ENST00000302938 MROH2BQ7Z745 1585 aa16.07■□□□□ 0.16
FAM71B-201ENST00000302938 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
FAM71B-201ENST00000302938 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
FAM71B-201ENST00000302938 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
FAM71B-201ENST00000302938 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
FAM71B-201ENST00000302938 PCGF6Q9BYE7 350 aa15.95■□□□□ 0.14
FAM71B-201ENST00000302938 TTBK1Q5TCY1 1321 aaPredicted RBP15.93■□□□□ 0.14
FAM71B-201ENST00000302938 WIZO95785 1651 aa15.89■□□□□ 0.13
FAM71B-201ENST00000302938 DNAJC5BQ9UF47 199 aa15.86■□□□□ 0.13
FAM71B-201ENST00000302938 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
FAM71B-201ENST00000302938 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
FAM71B-201ENST00000302938 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
FAM71B-201ENST00000302938 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
FAM71B-201ENST00000302938 NCAPD3P42695 1498 aa15.73■□□□□ 0.11
FAM71B-201ENST00000302938 BAZ1BQ9UIG0 1483 aaKnown RBP15.72■□□□□ 0.11
FAM71B-201ENST00000302938 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
FAM71B-201ENST00000302938 PRKCSHP14314 528 aaPredicted RBP15.63■□□□□ 0.09
FAM71B-201ENST00000302938 BCL11AQ9H165 835 aa15.62■□□□□ 0.09
FAM71B-201ENST00000302938 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
FAM71B-201ENST00000302938 HMGXB3Q12766 1538 aa15.6■□□□□ 0.09
FAM71B-201ENST00000302938 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
FAM71B-201ENST00000302938 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
FAM71B-201ENST00000302938 NEUROD1Q13562 356 aa15.51■□□□□ 0.07
FAM71B-201ENST00000302938 GTF3C3Q9Y5Q9 886 aa15.48■□□□□ 0.07
FAM71B-201ENST00000302938 CENPBP07199 599 aaPredicted RBP15.37■□□□□ 0.05
FAM71B-201ENST00000302938 CADPSQ9ULU8 1353 aa15.36■□□□□ 0.05
FAM71B-201ENST00000302938 NESP48681 1621 aa15.34■□□□□ 0.05
FAM71B-201ENST00000302938 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.04
FAM71B-201ENST00000302938 CHIC1Q5VXU3 224 aa15.33■□□□□ 0.04
FAM71B-201ENST00000302938 CFTRP13569 1480 aa15.31■□□□□ 0.04
FAM71B-201ENST00000302938 TRIM26Q12899 539 aaPredicted RBP15.21■□□□□ 0.03
FAM71B-201ENST00000302938 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
FAM71B-201ENST00000302938 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
FAM71B-201ENST00000302938 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
FAM71B-201ENST00000302938 LAMC3Q9Y6N6 1575 aa15.16■□□□□ 0.02
FAM71B-201ENST00000302938 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
FAM71B-201ENST00000302938 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
FAM71B-201ENST00000302938 APLP2Q06481 763 aa15.13■□□□□ 0.01
FAM71B-201ENST00000302938 WRNQ14191 1432 aaPredicted RBP eCLIP15.11■□□□□ 0.01
FAM71B-201ENST00000302938 ANP32EQ9BTT0 268 aa15.1■□□□□ 0.01
FAM71B-201ENST00000302938 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
FAM71B-201ENST00000302938 ERCC6Q03468 1493 aa15.05■□□□□ -0
FAM71B-201ENST00000302938 SYNJ1O43426 1573 aa15.02■□□□□ -0
FAM71B-201ENST00000302938 CUX1P39880 1505 aa15.02■□□□□ -0
FAM71B-201ENST00000302938 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
FAM71B-201ENST00000302938 KIF21AQ7Z4S6 1674 aa15.01□□□□□ -0.01
FAM71B-201ENST00000302938 CSRNP3Q8WYN3 585 aa15□□□□□ -0.01
FAM71B-201ENST00000302938 URB2Q14146 1524 aaKnown RBP14.99□□□□□ -0.01
FAM71B-201ENST00000302938 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
FAM71B-201ENST00000302938 TOP2BQ02880 1626 aa14.94□□□□□ -0.02
FAM71B-201ENST00000302938 MRC2Q9UBG0 1479 aa14.94□□□□□ -0.02
FAM71B-201ENST00000302938 SOGA1O94964 1423 aa14.91□□□□□ -0.02
FAM71B-201ENST00000302938 FGD5Q6ZNL6 1462 aa14.91□□□□□ -0.02
FAM71B-201ENST00000302938 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
FAM71B-201ENST00000302938 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
FAM71B-201ENST00000302938 RUSC2Q8N2Y8 1516 aa14.88□□□□□ -0.03
FAM71B-201ENST00000302938 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
FAM71B-201ENST00000302938 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
FAM71B-201ENST00000302938 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
FAM71B-201ENST00000302938 LOC105371045A0A1W2PR82 267 aa14.87□□□□□ -0.03
FAM71B-201ENST00000302938 DIEXFQ68CQ4 756 aaKnown RBP14.87□□□□□ -0.03
FAM71B-201ENST00000302938 WDR62O43379 1518 aa14.83□□□□□ -0.04
FAM71B-201ENST00000302938 THOC2Q8NI27 1593 aaKnown RBP14.82□□□□□ -0.04
FAM71B-201ENST00000302938 CUX2O14529 1486 aa14.81□□□□□ -0.04
FAM71B-201ENST00000302938 TDRD9Q8NDG6 1382 aaKnown RBP14.81□□□□□ -0.04
FAM71B-201ENST00000302938 KIF27Q86VH2 1401 aa14.74□□□□□ -0.05
FAM71B-201ENST00000302938 ABCA10Q8WWZ4 1543 aa14.73□□□□□ -0.05
FAM71B-201ENST00000302938 AQRO60306 1485 aaKnown RBP eCLIP14.73□□□□□ -0.05
FAM71B-201ENST00000302938 ZNF608Q9ULD9 1512 aaPredicted RBP14.72□□□□□ -0.05
FAM71B-201ENST00000302938 TSHZ2Q9NRE2 1034 aa14.72□□□□□ -0.05
FAM71B-201ENST00000302938 IFT140Q96RY7 1462 aa14.71□□□□□ -0.05
FAM71B-201ENST00000302938 IGF1RP08069 1367 aa14.71□□□□□ -0.05
FAM71B-201ENST00000302938 TARBP1Q13395 1621 aaKnown RBP14.7□□□□□ -0.06
FAM71B-201ENST00000302938 YTHDC1Q96MU7 727 aaKnown RBP14.7□□□□□ -0.06
FAM71B-201ENST00000302938 EEA1Q15075 1411 aa14.68□□□□□ -0.06
FAM71B-201ENST00000302938 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
FAM71B-201ENST00000302938 CARMIL1Q5VZK9 1371 aa14.61□□□□□ -0.07
FAM71B-201ENST00000302938 UBTFP17480 764 aaKnown RBP14.61□□□□□ -0.07
FAM71B-201ENST00000302938 WDR97A6NE52 1622 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms