RNA–Protein interactions for RNA: ENST00000510238.7

CASC16-201, Transcript of cancer susceptibility 16, humanhuman

TSL 1 (best) BASIC

Gene CASC16, Length 955 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC16-201ENST00000510238 AEBP2Q6ZN18 517 aaPredicted RBP24.79■■□□□ 1.56
CASC16-201ENST00000510238 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
CASC16-201ENST00000510238 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
CASC16-201ENST00000510238 SENP3Q9H4L4 574 aaPredicted RBP21.02■□□□□ 0.96
CASC16-201ENST00000510238 NISCHQ9Y2I1 1504 aa20.51■□□□□ 0.87
CASC16-201ENST00000510238 FOXD1Q16676 465 aa19.54■□□□□ 0.72
CASC16-201ENST00000510238 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
CASC16-201ENST00000510238 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
CASC16-201ENST00000510238 ADRA2BP18089 450 aa18.71■□□□□ 0.59
CASC16-201ENST00000510238 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
CASC16-201ENST00000510238 PIAS4Q8N2W9 510 aaPredicted RBP18.36■□□□□ 0.53
CASC16-201ENST00000510238 ABCC9O60706 1549 aa18.24■□□□□ 0.51
CASC16-201ENST00000510238 MSH5O43196 834 aa18.03■□□□□ 0.48
CASC16-201ENST00000510238 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
CASC16-201ENST00000510238 NACADO15069 1562 aa17.39■□□□□ 0.37
CASC16-201ENST00000510238 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
CASC16-201ENST00000510238 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
CASC16-201ENST00000510238 DCAF8L2P0C7V8 631 aa17.19■□□□□ 0.34
CASC16-201ENST00000510238 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
CASC16-201ENST00000510238 ZCCHC6Q5VYS8 1495 aaKnown RBP17.03■□□□□ 0.32
CASC16-201ENST00000510238 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
CASC16-201ENST00000510238 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
CASC16-201ENST00000510238 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
CASC16-201ENST00000510238 MAPK8IP2Q13387 824 aaPredicted RBP17.01■□□□□ 0.31
CASC16-201ENST00000510238 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
CASC16-201ENST00000510238 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
CASC16-201ENST00000510238 SHROOM4Q9ULL8 1493 aa16.81■□□□□ 0.28
CASC16-201ENST00000510238 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
CASC16-201ENST00000510238 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
CASC16-201ENST00000510238 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
CASC16-201ENST00000510238 KCNA4P22459 653 aa16.72■□□□□ 0.27
CASC16-201ENST00000510238 SCRIBQ14160 1630 aa16.69■□□□□ 0.26
CASC16-201ENST00000510238 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
CASC16-201ENST00000510238 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.23
CASC16-201ENST00000510238 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
CASC16-201ENST00000510238 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
CASC16-201ENST00000510238 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
CASC16-201ENST00000510238 RNF216Q9NWF9 866 aaPredicted RBP16.46■□□□□ 0.23
CASC16-201ENST00000510238 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
CASC16-201ENST00000510238 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
CASC16-201ENST00000510238 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
CASC16-201ENST00000510238 DCAF8L1A6NGE4 600 aa15.98■□□□□ 0.15
CASC16-201ENST00000510238 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
CASC16-201ENST00000510238 SMARCA2P51531 1590 aa15.96■□□□□ 0.15
CASC16-201ENST00000510238 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
CASC16-201ENST00000510238 HMGXB3Q12766 1538 aa15.94■□□□□ 0.14
CASC16-201ENST00000510238 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
CASC16-201ENST00000510238 PEG3Q9GZU2 1588 aa15.87■□□□□ 0.13
CASC16-201ENST00000510238 BAZ1BQ9UIG0 1483 aaKnown RBP15.82■□□□□ 0.12
CASC16-201ENST00000510238 CUX2O14529 1486 aa15.78■□□□□ 0.12
CASC16-201ENST00000510238 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
CASC16-201ENST00000510238 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.11
CASC16-201ENST00000510238 NESP48681 1621 aa15.68■□□□□ 0.1
CASC16-201ENST00000510238 LAMC3Q9Y6N6 1575 aa15.67■□□□□ 0.1
CASC16-201ENST00000510238 DNAJC5Q9H3Z4 198 aa15.64■□□□□ 0.09
CASC16-201ENST00000510238 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
CASC16-201ENST00000510238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
CASC16-201ENST00000510238 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.08
CASC16-201ENST00000510238 WIZO95785 1651 aa15.57■□□□□ 0.08
CASC16-201ENST00000510238 THOC2Q8NI27 1593 aaKnown RBP15.55■□□□□ 0.08
CASC16-201ENST00000510238 CADPSQ9ULU8 1353 aa15.55■□□□□ 0.08
CASC16-201ENST00000510238 KIF21AQ7Z4S6 1674 aa15.5■□□□□ 0.07
CASC16-201ENST00000510238 RSF1Q96T23 1441 aaPredicted RBP15.49■□□□□ 0.07
CASC16-201ENST00000510238 RNF39Q9H2S5 420 aa15.46■□□□□ 0.07
CASC16-201ENST00000510238 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
CASC16-201ENST00000510238 MRC2Q9UBG0 1479 aa15.41■□□□□ 0.06
CASC16-201ENST00000510238 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
CASC16-201ENST00000510238 ZBTB22O15209 634 aa15.4■□□□□ 0.06
CASC16-201ENST00000510238 CFTRP13569 1480 aa15.39■□□□□ 0.05
CASC16-201ENST00000510238 WDR62O43379 1518 aa15.38■□□□□ 0.05
CASC16-201ENST00000510238 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
CASC16-201ENST00000510238 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
CASC16-201ENST00000510238 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
CASC16-201ENST00000510238 EHMT2Q96KQ7 1210 aa15.31■□□□□ 0.04
CASC16-201ENST00000510238 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
CASC16-201ENST00000510238 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
CASC16-201ENST00000510238 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
CASC16-201ENST00000510238 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
CASC16-201ENST00000510238 CCDC88BA6NC98 1476 aa15.23■□□□□ 0.03
CASC16-201ENST00000510238 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
CASC16-201ENST00000510238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
CASC16-201ENST00000510238 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
CASC16-201ENST00000510238 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
CASC16-201ENST00000510238 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
CASC16-201ENST00000510238 IFT140Q96RY7 1462 aa15.08■□□□□ 0
CASC16-201ENST00000510238 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
CASC16-201ENST00000510238 TOPBP1Q92547 1522 aa15.07■□□□□ 0
CASC16-201ENST00000510238 OSCARQ8IYS5 282 aa15.04■□□□□ -0
CASC16-201ENST00000510238 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
CASC16-201ENST00000510238 ZNF608Q9ULD9 1512 aaPredicted RBP14.98□□□□□ -0.01
CASC16-201ENST00000510238 APLP2Q06481 763 aa14.98□□□□□ -0.01
CASC16-201ENST00000510238 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
CASC16-201ENST00000510238 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
CASC16-201ENST00000510238 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
CASC16-201ENST00000510238 ATXN8OSP0DMR3 200 aa14.92□□□□□ -0.02
CASC16-201ENST00000510238 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
CASC16-201ENST00000510238 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
CASC16-201ENST00000510238 CAPN15O75808 1086 aa14.87□□□□□ -0.03
CASC16-201ENST00000510238 WDR97A6NE52 1622 aa14.86□□□□□ -0.03
CASC16-201ENST00000510238 AQRO60306 1485 aaKnown RBP eCLIP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms