RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
LINC02549-201ENST00000445346 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
LINC02549-201ENST00000445346 PHF23Q9BUL5 403 aaPredicted RBP22.48■■□□□ 1.19
LINC02549-201ENST00000445346 SENP3Q9H4L4 574 aaPredicted RBP22.05■■□□□ 1.12
LINC02549-201ENST00000445346 FOXD1Q16676 465 aa20.72■□□□□ 0.91
LINC02549-201ENST00000445346 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
LINC02549-201ENST00000445346 PPP6R1Q9UPN7 881 aa19.91■□□□□ 0.78
LINC02549-201ENST00000445346 NISCHQ9Y2I1 1504 aa19.88■□□□□ 0.77
LINC02549-201ENST00000445346 ADRA2BP18089 450 aa19.8■□□□□ 0.76
LINC02549-201ENST00000445346 PIAS4Q8N2W9 510 aaPredicted RBP19.35■□□□□ 0.69
LINC02549-201ENST00000445346 MSH5O43196 834 aa18.9■□□□□ 0.62
LINC02549-201ENST00000445346 ABCC9O60706 1549 aa18.17■□□□□ 0.5
LINC02549-201ENST00000445346 MAPK8IP2Q13387 824 aaPredicted RBP18.08■□□□□ 0.48
LINC02549-201ENST00000445346 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
LINC02549-201ENST00000445346 CCDC180Q9P1Z9 1646 aa17.86■□□□□ 0.45
LINC02549-201ENST00000445346 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
LINC02549-201ENST00000445346 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
LINC02549-201ENST00000445346 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
LINC02549-201ENST00000445346 KCNA4P22459 653 aa17.51■□□□□ 0.39
LINC02549-201ENST00000445346 CNKSR2Q8WXI2 1034 aa17.46■□□□□ 0.39
LINC02549-201ENST00000445346 NPM3O75607 178 aaKnown RBP17.31■□□□□ 0.36
LINC02549-201ENST00000445346 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
LINC02549-201ENST00000445346 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
LINC02549-201ENST00000445346 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
LINC02549-201ENST00000445346 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
LINC02549-201ENST00000445346 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
LINC02549-201ENST00000445346 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
LINC02549-201ENST00000445346 NACADO15069 1562 aa16.99■□□□□ 0.31
LINC02549-201ENST00000445346 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC02549-201ENST00000445346 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
LINC02549-201ENST00000445346 UNC13AQ9UPW8 1703 aa16.67■□□□□ 0.26
LINC02549-201ENST00000445346 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
LINC02549-201ENST00000445346 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
LINC02549-201ENST00000445346 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
LINC02549-201ENST00000445346 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
LINC02549-201ENST00000445346 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
LINC02549-201ENST00000445346 SHROOM4Q9ULL8 1493 aa16.39■□□□□ 0.21
LINC02549-201ENST00000445346 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
LINC02549-201ENST00000445346 DCAF1Q9Y4B6 1507 aa16.38■□□□□ 0.21
LINC02549-201ENST00000445346 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
LINC02549-201ENST00000445346 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
LINC02549-201ENST00000445346 SCRIBQ14160 1630 aa16.34■□□□□ 0.21
LINC02549-201ENST00000445346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC02549-201ENST00000445346 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
LINC02549-201ENST00000445346 ZBTB22O15209 634 aa16.26■□□□□ 0.19
LINC02549-201ENST00000445346 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
LINC02549-201ENST00000445346 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
LINC02549-201ENST00000445346 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
LINC02549-201ENST00000445346 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
LINC02549-201ENST00000445346 CACNB1Q02641 598 aaPredicted RBP15.94■□□□□ 0.14
LINC02549-201ENST00000445346 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
LINC02549-201ENST00000445346 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
LINC02549-201ENST00000445346 SPINK5Q9NQ38 1064 aaPredicted RBP15.88■□□□□ 0.13
LINC02549-201ENST00000445346 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
LINC02549-201ENST00000445346 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
LINC02549-201ENST00000445346 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
LINC02549-201ENST00000445346 CUX2O14529 1486 aa15.71■□□□□ 0.1
LINC02549-201ENST00000445346 NCAPD3P42695 1498 aa15.71■□□□□ 0.1
LINC02549-201ENST00000445346 ATAD2BQ9ULI0 1458 aa15.63■□□□□ 0.09
LINC02549-201ENST00000445346 CAPN15O75808 1086 aa15.6■□□□□ 0.09
LINC02549-201ENST00000445346 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
LINC02549-201ENST00000445346 SMARCA2P51531 1590 aa15.58■□□□□ 0.08
LINC02549-201ENST00000445346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
LINC02549-201ENST00000445346 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
LINC02549-201ENST00000445346 DSG3P32926 999 aa15.53■□□□□ 0.08
LINC02549-201ENST00000445346 SMARCA4P51532 1647 aa15.53■□□□□ 0.08
LINC02549-201ENST00000445346 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
LINC02549-201ENST00000445346 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.08
LINC02549-201ENST00000445346 NESP48681 1621 aa15.52■□□□□ 0.08
LINC02549-201ENST00000445346 BAZ1BQ9UIG0 1483 aaKnown RBP15.49■□□□□ 0.07
LINC02549-201ENST00000445346 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
LINC02549-201ENST00000445346 ABCB7O75027 752 aa15.43■□□□□ 0.06
LINC02549-201ENST00000445346 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
LINC02549-201ENST00000445346 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
LINC02549-201ENST00000445346 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
LINC02549-201ENST00000445346 APLP2Q06481 763 aa15.35■□□□□ 0.05
LINC02549-201ENST00000445346 PEG3Q9GZU2 1588 aa15.35■□□□□ 0.05
LINC02549-201ENST00000445346 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
LINC02549-201ENST00000445346 THOC2Q8NI27 1593 aaKnown RBP15.34■□□□□ 0.05
LINC02549-201ENST00000445346 MROH2BQ7Z745 1585 aa15.32■□□□□ 0.04
LINC02549-201ENST00000445346 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
LINC02549-201ENST00000445346 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
LINC02549-201ENST00000445346 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
LINC02549-201ENST00000445346 POLA2Q14181 598 aa15.25■□□□□ 0.03
LINC02549-201ENST00000445346 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
LINC02549-201ENST00000445346 WIZO95785 1651 aa15.12■□□□□ 0.01
LINC02549-201ENST00000445346 WDR62O43379 1518 aa15.12■□□□□ 0.01
LINC02549-201ENST00000445346 CEP164Q9UPV0 1460 aa15.1■□□□□ 0.01
LINC02549-201ENST00000445346 FANCD2Q9BXW9 1451 aa15.07■□□□□ 0
LINC02549-201ENST00000445346 OSCARQ8IYS5 282 aa15.05■□□□□ -0
LINC02549-201ENST00000445346 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
LINC02549-201ENST00000445346 CFTRP13569 1480 aa15□□□□□ -0.01
LINC02549-201ENST00000445346 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
LINC02549-201ENST00000445346 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
LINC02549-201ENST00000445346 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
LINC02549-201ENST00000445346 IFT140Q96RY7 1462 aa14.81□□□□□ -0.04
LINC02549-201ENST00000445346 ZNF608Q9ULD9 1512 aaPredicted RBP14.79□□□□□ -0.04
LINC02549-201ENST00000445346 CCDC88BA6NC98 1476 aa14.78□□□□□ -0.04
LINC02549-201ENST00000445346 RIMBP3CA6NJZ7 1639 aa14.77□□□□□ -0.05
LINC02549-201ENST00000445346 RIMBP3BA6NNM3 1639 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms