RNA–Protein interactions for RNA: ENST00000408534.2

U3.38-201, humanhuman

BASIC

Gene U3, Length 216 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.38-201ENST00000408534 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
U3.38-201ENST00000408534 CCDC180Q9P1Z9 1646 aa16.9■□□□□ 0.3
U3.38-201ENST00000408534 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.28
U3.38-201ENST00000408534 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
U3.38-201ENST00000408534 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
U3.38-201ENST00000408534 SUPT5HO00267 1087 aaKnown RBP16.17■□□□□ 0.18
U3.38-201ENST00000408534 MYO15BQ96JP2 1530 aa16.13■□□□□ 0.17
U3.38-201ENST00000408534 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
U3.38-201ENST00000408534 HRCP23327 699 aa15.8■□□□□ 0.12
U3.38-201ENST00000408534 DCAF8L2P0C7V8 631 aa15.78■□□□□ 0.12
U3.38-201ENST00000408534 ABCC9O60706 1549 aa15.76■□□□□ 0.11
U3.38-201ENST00000408534 RSF1Q96T23 1441 aaPredicted RBP15.64■□□□□ 0.09
U3.38-201ENST00000408534 NACADO15069 1562 aa15.62■□□□□ 0.09
U3.38-201ENST00000408534 RB1CC1Q8TDY2 1594 aa15.55■□□□□ 0.08
U3.38-201ENST00000408534 TRIM26Q12899 539 aaPredicted RBP15.47■□□□□ 0.07
U3.38-201ENST00000408534 PCGF6Q9BYE7 350 aa15.44■□□□□ 0.06
U3.38-201ENST00000408534 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
U3.38-201ENST00000408534 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
U3.38-201ENST00000408534 LOC105371045A0A1W2PR82 267 aa15.36■□□□□ 0.05
U3.38-201ENST00000408534 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
U3.38-201ENST00000408534 MROH2BQ7Z745 1585 aa15.22■□□□□ 0.03
U3.38-201ENST00000408534 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.03
U3.38-201ENST00000408534 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
U3.38-201ENST00000408534 EIF4G1Q04637 1599 aaKnown RBP15.11■□□□□ 0.01
U3.38-201ENST00000408534 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
U3.38-201ENST00000408534 WIZO95785 1651 aa15.05■□□□□ -0
U3.38-201ENST00000408534 EEA1Q15075 1411 aa15.02■□□□□ -0
U3.38-201ENST00000408534 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
U3.38-201ENST00000408534 PPARGC1BQ86YN6 1023 aaKnown RBP15□□□□□ -0.01
U3.38-201ENST00000408534 SMARCA4P51532 1647 aa14.97□□□□□ -0.01
U3.38-201ENST00000408534 PEG3Q9GZU2 1588 aa14.93□□□□□ -0.02
U3.38-201ENST00000408534 CCDC88BA6NC98 1476 aa14.91□□□□□ -0.02
U3.38-201ENST00000408534 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
U3.38-201ENST00000408534 TNIKQ9UKE5 1360 aa14.89□□□□□ -0.03
U3.38-201ENST00000408534 FAM9AQ8IZU1 332 aaPredicted RBP14.81□□□□□ -0.04
U3.38-201ENST00000408534 UNC13AQ9UPW8 1703 aa14.77□□□□□ -0.05
U3.38-201ENST00000408534 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
U3.38-201ENST00000408534 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
U3.38-201ENST00000408534 BICRAQ9NZM4 1560 aa14.72□□□□□ -0.05
U3.38-201ENST00000408534 CEP162Q5TB80 1403 aa14.71□□□□□ -0.05
U3.38-201ENST00000408534 GOLGA3Q08378 1498 aa14.68□□□□□ -0.06
U3.38-201ENST00000408534 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
U3.38-201ENST00000408534 KIF21BO75037 1637 aa14.65□□□□□ -0.06
U3.38-201ENST00000408534 BAZ1BQ9UIG0 1483 aaKnown RBP14.64□□□□□ -0.07
U3.38-201ENST00000408534 SOGA1O94964 1423 aa14.64□□□□□ -0.07
U3.38-201ENST00000408534 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
U3.38-201ENST00000408534 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
U3.38-201ENST00000408534 CCER1Q8TC90 406 aaPredicted RBP14.56□□□□□ -0.08
U3.38-201ENST00000408534 CLSPNQ9HAW4 1339 aa14.5□□□□□ -0.09
U3.38-201ENST00000408534 RUSC2Q8N2Y8 1516 aa14.5□□□□□ -0.09
U3.38-201ENST00000408534 VPS8Q8N3P4 1428 aa14.48□□□□□ -0.09
U3.38-201ENST00000408534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
U3.38-201ENST00000408534 UBTFP17480 764 aaKnown RBP14.47□□□□□ -0.09
U3.38-201ENST00000408534 NCAPD3P42695 1498 aa14.46□□□□□ -0.09
U3.38-201ENST00000408534 TOP2BQ02880 1626 aa14.46□□□□□ -0.09
U3.38-201ENST00000408534 SYNJ1O43426 1573 aa14.46□□□□□ -0.09
U3.38-201ENST00000408534 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.1
U3.38-201ENST00000408534 CLIP1P30622 1438 aa14.44□□□□□ -0.1
U3.38-201ENST00000408534 ACIN1Q9UKV3 1341 aaKnown RBP14.43□□□□□ -0.1
U3.38-201ENST00000408534 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
U3.38-201ENST00000408534 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
U3.38-201ENST00000408534 DIEXFQ68CQ4 756 aaKnown RBP14.42□□□□□ -0.1
U3.38-201ENST00000408534 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
U3.38-201ENST00000408534 PRXQ9BXM0 1461 aa14.4□□□□□ -0.1
U3.38-201ENST00000408534 ZNF316A6NFI3 1004 aaPredicted RBP14.4□□□□□ -0.1
U3.38-201ENST00000408534 CENPBP07199 599 aaPredicted RBP14.4□□□□□ -0.1
U3.38-201ENST00000408534 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
U3.38-201ENST00000408534 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
U3.38-201ENST00000408534 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
U3.38-201ENST00000408534 APLP2Q06481 763 aa14.29□□□□□ -0.12
U3.38-201ENST00000408534 CFTRP13569 1480 aa14.29□□□□□ -0.12
U3.38-201ENST00000408534 CUX2O14529 1486 aa14.28□□□□□ -0.12
U3.38-201ENST00000408534 MAP3K1Q13233 1512 aa14.28□□□□□ -0.12
U3.38-201ENST00000408534 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
U3.38-201ENST00000408534 RRBP1Q9P2E9 1410 aaKnown RBP14.24□□□□□ -0.13
U3.38-201ENST00000408534 NEUROD1Q13562 356 aa14.24□□□□□ -0.13
U3.38-201ENST00000408534 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
U3.38-201ENST00000408534 CUX1P39880 1505 aa14.18□□□□□ -0.14
U3.38-201ENST00000408534 MYT1Q01538 1121 aa14.16□□□□□ -0.14
U3.38-201ENST00000408534 PRDM2Q13029 1718 aa14.12□□□□□ -0.15
U3.38-201ENST00000408534 DHX57Q6P158 1386 aaKnown RBP14.12□□□□□ -0.15
U3.38-201ENST00000408534 TIMELESSQ9UNS1 1208 aa14.1□□□□□ -0.15
U3.38-201ENST00000408534 IGF1RP08069 1367 aa14.09□□□□□ -0.15
U3.38-201ENST00000408534 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
U3.38-201ENST00000408534 GTF3C3Q9Y5Q9 886 aa14.09□□□□□ -0.15
U3.38-201ENST00000408534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.09□□□□□ -0.15
U3.38-201ENST00000408534 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
U3.38-201ENST00000408534 ARHGAP35Q9NRY4 1499 aa14.07□□□□□ -0.16
U3.38-201ENST00000408534 CCNB3Q8WWL7 1395 aa14.06□□□□□ -0.16
U3.38-201ENST00000408534 MIER1Q8N108 512 aa14.03□□□□□ -0.16
U3.38-201ENST00000408534 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
U3.38-201ENST00000408534 KANK4Q5T7N3 995 aaPredicted RBP14□□□□□ -0.17
U3.38-201ENST00000408534 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
U3.38-201ENST00000408534 CARMIL1Q5VZK9 1371 aa13.99□□□□□ -0.17
U3.38-201ENST00000408534 TTBK1Q5TCY1 1321 aaPredicted RBP13.97□□□□□ -0.17
U3.38-201ENST00000408534 TIAM1Q13009 1591 aa13.96□□□□□ -0.17
U3.38-201ENST00000408534 LRRC9Q6ZRR7 1453 aa13.93□□□□□ -0.18
U3.38-201ENST00000408534 EFCAB5A4FU69 1503 aa13.93□□□□□ -0.18
U3.38-201ENST00000408534 SETD5Q9C0A6 1442 aa13.91□□□□□ -0.18
U3.38-201ENST00000408534 ABCA10Q8WWZ4 1543 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms