Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.22■■□□□ 1.31
PTCH2Q9Y6C5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PTCH2Q9Y6C5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PTCH2Q9Y6C5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.22■■□□□ 1.31
PTCH2Q9Y6C5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PTCH2Q9Y6C5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.22■■□□□ 1.31
PTCH2Q9Y6C5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
PTCH2Q9Y6C5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 NUDT16P1-203ENST00000513809 620 ntBASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 AC073195.1-201ENST00000607241 877 ntBASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 CYP2D8P-201ENST00000433633 1490 ntBASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PTCH2Q9Y6C5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 AC026471.6-201ENST00000622954 1905 ntBASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 AC068473.5-201ENST00000616428 2072 ntBASIC23.2■■□□□ 1.3
PTCH2Q9Y6C5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 KRT18P22-201ENST00000402024 1347 ntBASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 AL390955.1-201ENST00000428694 934 ntBASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 SLC25A3P1-201ENST00000443844 931 ntBASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 NAPSB-206ENST00000562112 1266 ntBASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTCH2Q9Y6C5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 AC092053.2-201ENST00000640557 1818 ntBASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PTCH2Q9Y6C5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 WWOX-216ENST00000569818 525 ntBASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 AC010947.1-201ENST00000623454 693 ntBASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.17■■□□□ 1.3
PTCH2Q9Y6C5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.16■■□□□ 1.3
PTCH2Q9Y6C5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTCH2Q9Y6C5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.16■■□□□ 1.3
PTCH2Q9Y6C5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms