Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRDM4Q9UKN5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRDM4Q9UKN5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 AL049796.1-201ENST00000565336 1766 ntBASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 AC120024.1-201ENST00000562672 995 ntBASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 THA1P-201ENST00000590384 1145 ntBASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 PVT1_1.1-201ENST00000615125 194 ntBASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 AL022069.1-201ENST00000568025 1636 ntBASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRDM4Q9UKN5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRDM4Q9UKN5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.02■□□□□ 0.95
PRDM4Q9UKN5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRDM4Q9UKN5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRDM4Q9UKN5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.01■□□□□ 0.95
PRDM4Q9UKN5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms