Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.29■□□□□ 0.84
SPASTQ9UBP0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.29■□□□□ 0.84
SPASTQ9UBP0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPASTQ9UBP0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPASTQ9UBP0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SPASTQ9UBP0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.29■□□□□ 0.84
SPASTQ9UBP0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.29■□□□□ 0.84
SPASTQ9UBP0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPASTQ9UBP0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.29■□□□□ 0.84
SPASTQ9UBP0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 PRORSD1P-201ENST00000295112 541 ntBASIC20.28■□□□□ 0.84
SPASTQ9UBP0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 KRT18P68-201ENST00000392293 1000 ntBASIC20.28■□□□□ 0.84
SPASTQ9UBP0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SPASTQ9UBP0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPASTQ9UBP0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPASTQ9UBP0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SPASTQ9UBP0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.27■□□□□ 0.84
SPASTQ9UBP0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPASTQ9UBP0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPASTQ9UBP0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SPASTQ9UBP0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPASTQ9UBP0 UNC93B5-201ENST00000530315 699 ntBASIC20.27■□□□□ 0.84
SPASTQ9UBP0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.27■□□□□ 0.84
SPASTQ9UBP0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPASTQ9UBP0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.27■□□□□ 0.83
SPASTQ9UBP0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SPASTQ9UBP0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPASTQ9UBP0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SPASTQ9UBP0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPASTQ9UBP0 Z98882.1-201ENST00000622160 2253 ntBASIC20.25■□□□□ 0.83
SPASTQ9UBP0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPASTQ9UBP0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.25■□□□□ 0.83
SPASTQ9UBP0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPASTQ9UBP0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPASTQ9UBP0 AC026366.1-201ENST00000488803 879 ntBASIC20.25■□□□□ 0.83
SPASTQ9UBP0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPASTQ9UBP0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPASTQ9UBP0 AC006058.3-201ENST00000606217 1069 ntBASIC20.25■□□□□ 0.83
SPASTQ9UBP0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPASTQ9UBP0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
SPASTQ9UBP0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
SPASTQ9UBP0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.25■□□□□ 0.83
SPASTQ9UBP0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPASTQ9UBP0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms