Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC26.7■■□□□ 1.87
PCDH11XQ9BZA7 AL355075.4-201ENST00000554988 638 ntBASIC26.7■■□□□ 1.87
PCDH11XQ9BZA7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.7■■□□□ 1.87
PCDH11XQ9BZA7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.7■■□□□ 1.87
PCDH11XQ9BZA7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.7■■□□□ 1.87
PCDH11XQ9BZA7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH11XQ9BZA7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH11XQ9BZA7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH11XQ9BZA7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH11XQ9BZA7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH11XQ9BZA7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH11XQ9BZA7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH11XQ9BZA7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDH11XQ9BZA7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 KRT18P21-201ENST00000515767 1272 ntBASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDH11XQ9BZA7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDH11XQ9BZA7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 AC133561.5-201ENST00000635547 218 ntBASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDH11XQ9BZA7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
PCDH11XQ9BZA7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 AC012306.2-201ENST00000609350 630 ntBASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 AC097493.4-201ENST00000641197 219 ntBASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDH11XQ9BZA7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
PCDH11XQ9BZA7 GUSBP5-202ENST00000510805 1989 ntBASIC26.64■■□□□ 1.85
PCDH11XQ9BZA7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDH11XQ9BZA7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PCDH11XQ9BZA7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PCDH11XQ9BZA7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms