Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.18■□□□□ 0.66
YIPF4Q9BSR8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 PCDHAC2-203ENST00000615316 3011 ntBASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 AC091799.1-201ENST00000422823 811 ntBASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.17■□□□□ 0.66
YIPF4Q9BSR8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 GABARAPL3-202ENST00000624044 1851 ntBASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 AC137761.2-201ENST00000561729 223 ntBASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 SLC7A5P1-201ENST00000568957 537 ntBASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 AC145350.3-201ENST00000569033 163 ntBASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
YIPF4Q9BSR8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
YIPF4Q9BSR8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
YIPF4Q9BSR8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.14■□□□□ 0.66
YIPF4Q9BSR8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
YIPF4Q9BSR8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 AC020907.5-201ENST00000624372 1936 ntBASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 ID1-201ENST00000376105 1233 ntBASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 AC016769.1-201ENST00000409132 1010 ntBASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 AC243732.1-201ENST00000612648 864 ntBASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms