Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.6□□□□□ -0.23
LITAFQ99732 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.6□□□□□ -0.23
LITAFQ99732 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
LITAFQ99732 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LITAFQ99732 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
LITAFQ99732 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
LITAFQ99732 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LITAFQ99732 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LITAFQ99732 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.59□□□□□ -0.23
LITAFQ99732 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
LITAFQ99732 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LITAFQ99732 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LITAFQ99732 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 CD72-202ENST00000378430 585 ntTSL 3 BASIC13.59□□□□□ -0.23
LITAFQ99732 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 HES6-204ENST00000409182 863 ntTSL 2 BASIC13.59□□□□□ -0.23
LITAFQ99732 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
LITAFQ99732 AC103724.3-201ENST00000564481 992 ntBASIC13.59□□□□□ -0.23
LITAFQ99732 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.59□□□□□ -0.23
LITAFQ99732 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LITAFQ99732 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LITAFQ99732 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LITAFQ99732 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LITAFQ99732 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LITAFQ99732 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.23
LITAFQ99732 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.58□□□□□ -0.23
LITAFQ99732 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LITAFQ99732 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.58□□□□□ -0.24
LITAFQ99732 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC13.58□□□□□ -0.24
LITAFQ99732 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LITAFQ99732 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LITAFQ99732 AC005332.8-201ENST00000622750 2735 ntBASIC13.58□□□□□ -0.24
LITAFQ99732 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.58□□□□□ -0.24
LITAFQ99732 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LITAFQ99732 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LITAFQ99732 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.57□□□□□ -0.24
LITAFQ99732 AL691432.2-201ENST00000607222 2038 ntBASIC13.57□□□□□ -0.24
LITAFQ99732 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.57□□□□□ -0.24
LITAFQ99732 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.57□□□□□ -0.24
LITAFQ99732 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC13.57□□□□□ -0.24
LITAFQ99732 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
LITAFQ99732 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.57□□□□□ -0.24
LITAFQ99732 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.57□□□□□ -0.24
LITAFQ99732 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.57□□□□□ -0.24
LITAFQ99732 AC103834.1-201ENST00000520383 144 ntBASIC13.57□□□□□ -0.24
LITAFQ99732 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LITAFQ99732 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.57□□□□□ -0.24
LITAFQ99732 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.57□□□□□ -0.24
LITAFQ99732 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LITAFQ99732 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LITAFQ99732 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC13.57□□□□□ -0.24
LITAFQ99732 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.57□□□□□ -0.24
LITAFQ99732 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.56□□□□□ -0.24
LITAFQ99732 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LITAFQ99732 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms