Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF558Q96NG5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF558Q96NG5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 BX088651.1-201ENST00000540551 451 ntBASIC21.79■■□□□ 1.08
ZNF558Q96NG5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 AC233723.2-201ENST00000623798 2106 ntBASIC21.79■■□□□ 1.08
ZNF558Q96NG5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF558Q96NG5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.78■■□□□ 1.08
ZNF558Q96NG5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF558Q96NG5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF558Q96NG5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.78■■□□□ 1.08
ZNF558Q96NG5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF558Q96NG5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.78■■□□□ 1.08
ZNF558Q96NG5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.78■■□□□ 1.08
ZNF558Q96NG5 LINC01023-201ENST00000606054 436 ntBASIC21.78■■□□□ 1.08
ZNF558Q96NG5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF558Q96NG5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ZNF558Q96NG5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 PRKY-204ENST00000533551 1019 ntBASIC21.77■■□□□ 1.08
ZNF558Q96NG5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.77■■□□□ 1.08
ZNF558Q96NG5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ZNF558Q96NG5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ZNF558Q96NG5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 RARRES2P10-201ENST00000564312 460 ntBASIC21.76■■□□□ 1.07
ZNF558Q96NG5 MIR4785-201ENST00000585005 73 ntBASIC21.76■■□□□ 1.07
ZNF558Q96NG5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.76■■□□□ 1.07
ZNF558Q96NG5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms