Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
ATP6V0A1Q93050 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.9■■□□□ 1.26
ATP6V0A1Q93050 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ATP6V0A1Q93050 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
ATP6V0A1Q93050 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.89■■□□□ 1.26
ATP6V0A1Q93050 AC121338.2-201ENST00000622535 1744 ntBASIC22.89■■□□□ 1.26
ATP6V0A1Q93050 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 AC026310.3-201ENST00000625186 2373 ntBASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.89■■□□□ 1.25
ATP6V0A1Q93050 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 PNMA6B-201ENST00000538162 1200 ntBASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ATP6V0A1Q93050 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 AC092368.3-202ENST00000574180 1591 ntBASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.87■■□□□ 1.25
ATP6V0A1Q93050 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 AC027702.1-201ENST00000563810 1770 ntBASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 AF106564.1-201ENST00000607058 2553 ntBASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
ATP6V0A1Q93050 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 UNC93B4-201ENST00000505679 747 ntBASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 AL356652.1-201ENST00000615962 565 ntBASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ATP6V0A1Q93050 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.84■■□□□ 1.25
ATP6V0A1Q93050 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms