Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.52■□□□□ 0.56
HPS1Q92902 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.52■□□□□ 0.56
HPS1Q92902 AP005435.1-201ENST00000529293 1178 ntBASIC18.52■□□□□ 0.56
HPS1Q92902 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HPS1Q92902 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HPS1Q92902 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.52■□□□□ 0.55
HPS1Q92902 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.52■□□□□ 0.55
HPS1Q92902 AC120498.9-201ENST00000339021 3867 ntBASIC18.51■□□□□ 0.55
HPS1Q92902 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HPS1Q92902 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.51■□□□□ 0.55
HPS1Q92902 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.51■□□□□ 0.55
HPS1Q92902 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HPS1Q92902 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.51■□□□□ 0.55
HPS1Q92902 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 TNXA-203ENST00000507684 2038 ntBASIC18.51■□□□□ 0.55
HPS1Q92902 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.51■□□□□ 0.55
HPS1Q92902 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
HPS1Q92902 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.51■□□□□ 0.55
HPS1Q92902 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HPS1Q92902 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.51■□□□□ 0.55
HPS1Q92902 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 LTB4R2-202ENST00000528054 3092 ntBASIC18.51■□□□□ 0.55
HPS1Q92902 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HPS1Q92902 AP000974.1-201ENST00000623909 2387 ntBASIC18.5■□□□□ 0.55
HPS1Q92902 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS1Q92902 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HPS1Q92902 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.5■□□□□ 0.55
HPS1Q92902 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.5■□□□□ 0.55
HPS1Q92902 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS1Q92902 AP005212.1-201ENST00000581547 1997 ntBASIC18.5■□□□□ 0.55
HPS1Q92902 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
HPS1Q92902 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS1Q92902 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.5■□□□□ 0.55
HPS1Q92902 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HPS1Q92902 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HPS1Q92902 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HPS1Q92902 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.5■□□□□ 0.55
HPS1Q92902 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HPS1Q92902 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS1Q92902 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS1Q92902 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS1Q92902 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.5■□□□□ 0.55
HPS1Q92902 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HPS1Q92902 NEFHP1-201ENST00000412845 2629 ntBASIC18.5■□□□□ 0.55
HPS1Q92902 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.5■□□□□ 0.55
HPS1Q92902 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HPS1Q92902 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.49■□□□□ 0.55
HPS1Q92902 AC012414.1-201ENST00000556676 535 ntBASIC18.49■□□□□ 0.55
HPS1Q92902 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.49■□□□□ 0.55
HPS1Q92902 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
HPS1Q92902 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.49■□□□□ 0.55
HPS1Q92902 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HPS1Q92902 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.48■□□□□ 0.55
HPS1Q92902 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.48■□□□□ 0.55
HPS1Q92902 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.48■□□□□ 0.55
HPS1Q92902 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 AC010525.1-201ENST00000585559 441 ntBASIC18.48■□□□□ 0.55
HPS1Q92902 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 LINC01960-201ENST00000563759 1884 ntBASIC18.48■□□□□ 0.55
HPS1Q92902 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HPS1Q92902 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
HPS1Q92902 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms