Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC073130.3-201ENST00000624389 2278 ntBASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP1Q8TDR0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP1Q8TDR0 AC020907.5-201ENST00000624372 1936 ntBASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 AC091799.1-201ENST00000422823 811 ntBASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 AC007322.3-201ENST00000426526 701 ntBASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRAF3IP1Q8TDR0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP1Q8TDR0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 CDV3P1-201ENST00000471403 739 ntBASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAF3IP1Q8TDR0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
TRAF3IP1Q8TDR0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
TRAF3IP1Q8TDR0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP1Q8TDR0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP1Q8TDR0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms