Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RAB3IL1Q8TBN0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 BX323043.1-201ENST00000641006 1765 ntBASIC20.29■□□□□ 0.84
RAB3IL1Q8TBN0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB3IL1Q8TBN0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB3IL1Q8TBN0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
RAB3IL1Q8TBN0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAB3IL1Q8TBN0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 AC005224.4-201ENST00000583262 1652 ntBASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB3IL1Q8TBN0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 BX842568.3-201ENST00000418104 571 ntBASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB3IL1Q8TBN0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms