Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCML4Q8N228 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCML4Q8N228 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.29■■□□□ 1
SCML4Q8N228 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.29■■□□□ 1
SCML4Q8N228 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SCML4Q8N228 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCML4Q8N228 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.29■■□□□ 1
SCML4Q8N228 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SCML4Q8N228 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCML4Q8N228 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.29■■□□□ 1
SCML4Q8N228 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.29■■□□□ 1
SCML4Q8N228 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCML4Q8N228 AL121603.2-201ENST00000557373 2117 ntBASIC21.28■■□□□ 1
SCML4Q8N228 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCML4Q8N228 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCML4Q8N228 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SCML4Q8N228 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.28■■□□□ 1
SCML4Q8N228 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SCML4Q8N228 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCML4Q8N228 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCML4Q8N228 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.28■■□□□ 1
SCML4Q8N228 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SCML4Q8N228 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCML4Q8N228 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.28■■□□□ 1
SCML4Q8N228 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.27■■□□□ 1
SCML4Q8N228 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCML4Q8N228 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCML4Q8N228 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCML4Q8N228 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.27■■□□□ 1
SCML4Q8N228 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCML4Q8N228 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCML4Q8N228 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCML4Q8N228 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.27■■□□□ 1
SCML4Q8N228 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.27■■□□□ 1
SCML4Q8N228 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
SCML4Q8N228 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.27■■□□□ 1
SCML4Q8N228 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.27■■□□□ 1
SCML4Q8N228 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SCML4Q8N228 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCML4Q8N228 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCML4Q8N228 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
SCML4Q8N228 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.27■□□□□ 0.99
SCML4Q8N228 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SCML4Q8N228 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCML4Q8N228 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.26■□□□□ 0.99
SCML4Q8N228 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.26■□□□□ 0.99
SCML4Q8N228 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
SCML4Q8N228 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.26■□□□□ 0.99
SCML4Q8N228 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SCML4Q8N228 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 FP700111.2-201ENST00000619190 1892 ntBASIC21.26■□□□□ 0.99
SCML4Q8N228 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCML4Q8N228 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.26■□□□□ 0.99
SCML4Q8N228 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SCML4Q8N228 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.26■□□□□ 0.99
SCML4Q8N228 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCML4Q8N228 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCML4Q8N228 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCML4Q8N228 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCML4Q8N228 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCML4Q8N228 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.25■□□□□ 0.99
SCML4Q8N228 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.25■□□□□ 0.99
SCML4Q8N228 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.25■□□□□ 0.99
SCML4Q8N228 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCML4Q8N228 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.25■□□□□ 0.99
SCML4Q8N228 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.25■□□□□ 0.99
SCML4Q8N228 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCML4Q8N228 AL137060.1-201ENST00000618151 2648 ntBASIC21.25■□□□□ 0.99
SCML4Q8N228 HLA-B-256ENST00000639848 1089 ntBASIC21.25■□□□□ 0.99
SCML4Q8N228 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCML4Q8N228 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SCML4Q8N228 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCML4Q8N228 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SCML4Q8N228 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCML4Q8N228 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCML4Q8N228 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCML4Q8N228 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.24■□□□□ 0.99
SCML4Q8N228 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCML4Q8N228 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SCML4Q8N228 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.24■□□□□ 0.99
SCML4Q8N228 KRT18P6-201ENST00000555540 1265 ntBASIC21.24■□□□□ 0.99
SCML4Q8N228 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.24■□□□□ 0.99
SCML4Q8N228 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCML4Q8N228 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCML4Q8N228 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCML4Q8N228 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCML4Q8N228 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.24■□□□□ 0.99
SCML4Q8N228 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms