Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 YBX1P1-201ENST00000445822 960 ntBASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 SMUG1P1-201ENST00000590640 811 ntBASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 AL354811.1-201ENST00000610286 706 ntBASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 AC092666.2-201ENST00000613287 246 ntBASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CRLF3Q8IUI8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 AC027612.3-201ENST00000413684 1047 ntBASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 AL162430.1-201ENST00000480705 870 ntBASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.31■□□□□ 0.84
CRLF3Q8IUI8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CRLF3Q8IUI8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CRLF3Q8IUI8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 AC105233.4-201ENST00000642045 216 ntBASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CRLF3Q8IUI8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 BX005040.4-201ENST00000637145 1518 ntBASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 AC011484.1-201ENST00000377652 1995 ntBASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 AC034268.1-201ENST00000441047 882 ntBASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CRLF3Q8IUI8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms