Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTN4RL1Q86UN2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTN4RL1Q86UN2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.13■■□□□ 1.13
RTN4RL1Q86UN2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RTN4RL1Q86UN2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.13■■□□□ 1.13
RTN4RL1Q86UN2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 TSPY7P-201ENST00000431358 1114 ntBASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 AC110285.5-201ENST00000611501 352 ntBASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RTN4RL1Q86UN2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RTN4RL1Q86UN2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 KRASP1-201ENST00000407852 552 ntBASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 AC239809.2-201ENST00000415381 517 ntBASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 AC011484.1-201ENST00000377652 1995 ntBASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.1■■□□□ 1.13
RTN4RL1Q86UN2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 AL390719.1-204ENST00000412397 1219 ntBASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 TSPY15P-201ENST00000457163 923 ntBASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 AL049637.2-201ENST00000641778 930 ntBASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.09■■□□□ 1.13
RTN4RL1Q86UN2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTN4RL1Q86UN2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RTN4RL1Q86UN2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RTN4RL1Q86UN2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTN4RL1Q86UN2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTN4RL1Q86UN2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RTN4RL1Q86UN2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms