Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LCA10Q71F78 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC10.98□□□□□ -0.65
LCA10Q71F78 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
LCA10Q71F78 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LCA10Q71F78 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LCA10Q71F78 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC10.98□□□□□ -0.65
LCA10Q71F78 EML3-216ENST00000529309 2909 ntTSL 2 BASIC10.98□□□□□ -0.65
LCA10Q71F78 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LCA10Q71F78 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC10.98□□□□□ -0.65
LCA10Q71F78 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LCA10Q71F78 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LCA10Q71F78 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LCA10Q71F78 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
LCA10Q71F78 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
LCA10Q71F78 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LCA10Q71F78 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC10.97□□□□□ -0.65
LCA10Q71F78 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
LCA10Q71F78 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC10.97□□□□□ -0.65
LCA10Q71F78 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC10.97□□□□□ -0.65
LCA10Q71F78 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LCA10Q71F78 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 NFIC-211ENST00000641145 8399 ntBASIC10.97□□□□□ -0.65
LCA10Q71F78 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC10.97□□□□□ -0.65
LCA10Q71F78 LSM7-203ENST00000585409 512 ntTSL 2 BASIC10.97□□□□□ -0.65
LCA10Q71F78 AC074183.2-201ENST00000623112 922 ntBASIC10.97□□□□□ -0.65
LCA10Q71F78 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LCA10Q71F78 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
LCA10Q71F78 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC10.97□□□□□ -0.65
LCA10Q71F78 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LCA10Q71F78 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LCA10Q71F78 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC10.97□□□□□ -0.65
LCA10Q71F78 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LCA10Q71F78 HR-201ENST00000312841 5351 ntTSL 5 BASIC10.96□□□□□ -0.65
LCA10Q71F78 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LCA10Q71F78 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC10.96□□□□□ -0.65
LCA10Q71F78 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
LCA10Q71F78 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LCA10Q71F78 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LCA10Q71F78 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LCA10Q71F78 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC10.96□□□□□ -0.65
LCA10Q71F78 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC10.96□□□□□ -0.65
LCA10Q71F78 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
LCA10Q71F78 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LCA10Q71F78 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC10.96□□□□□ -0.65
LCA10Q71F78 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LCA10Q71F78 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LCA10Q71F78 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LCA10Q71F78 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LCA10Q71F78 BEX3-202ENST00000372634 753 ntTSL 2 BASIC10.96□□□□□ -0.65
LCA10Q71F78 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC10.96□□□□□ -0.65
LCA10Q71F78 AC004987.1-201ENST00000428627 508 ntBASIC10.96□□□□□ -0.65
LCA10Q71F78 AC010980.1-201ENST00000587192 1142 ntBASIC10.96□□□□□ -0.65
LCA10Q71F78 PVT1_1.1-201ENST00000615125 194 ntBASIC10.96□□□□□ -0.65
LCA10Q71F78 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LCA10Q71F78 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC10.96□□□□□ -0.65
LCA10Q71F78 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LCA10Q71F78 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LCA10Q71F78 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LCA10Q71F78 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LCA10Q71F78 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC10.96□□□□□ -0.66
LCA10Q71F78 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LCA10Q71F78 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LCA10Q71F78 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LCA10Q71F78 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC10.96□□□□□ -0.66
LCA10Q71F78 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
LCA10Q71F78 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
LCA10Q71F78 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.66
LCA10Q71F78 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
LCA10Q71F78 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LCA10Q71F78 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC10.95□□□□□ -0.66
LCA10Q71F78 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
LCA10Q71F78 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 AC144652.1-201ENST00000609974 1624 ntBASIC10.95□□□□□ -0.66
LCA10Q71F78 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
LCA10Q71F78 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC10.95□□□□□ -0.66
LCA10Q71F78 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LCA10Q71F78 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms