Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NHLRC1Q6VVB1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NHLRC1Q6VVB1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NHLRC1Q6VVB1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NHLRC1Q6VVB1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NHLRC1Q6VVB1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NHLRC1Q6VVB1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NHLRC1Q6VVB1 AL162412.1-201ENST00000567129 965 ntBASIC18.3■□□□□ 0.52
NHLRC1Q6VVB1 AP005212.1-201ENST00000581547 1997 ntBASIC18.3■□□□□ 0.52
NHLRC1Q6VVB1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NHLRC1Q6VVB1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NHLRC1Q6VVB1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NHLRC1Q6VVB1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 AC016769.1-201ENST00000409132 1010 ntBASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 AC007322.3-201ENST00000426526 701 ntBASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 AL591742.1-201ENST00000604433 565 ntBASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 MIR2861-201ENST00000636310 90 ntBASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.29■□□□□ 0.52
NHLRC1Q6VVB1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 AC013268.1-206ENST00000638368 961 ntBASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 AC112229.1-201ENST00000639295 961 ntBASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 AC073314.1-201ENST00000568729 2216 ntBASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.28■□□□□ 0.52
NHLRC1Q6VVB1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 AC068338.2-201ENST00000563278 1430 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms