Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC027702.1-201ENST00000563810 1770 ntBASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 AC006128.1-201ENST00000624704 1661 ntBASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 SLC29A4P1-201ENST00000398760 971 ntBASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 CYP21A1P-202ENST00000354927 1481 ntBASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDLRAP1Q5SW96 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.28■□□□□ 0.84
LDLRAP1Q5SW96 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 TSPY6P-201ENST00000448518 926 ntBASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 AL109923.1-201ENST00000618799 583 ntBASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDLRAP1Q5SW96 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LDLRAP1Q5SW96 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LDLRAP1Q5SW96 AC087633.2-202ENST00000565166 1439 ntBASIC20.27■□□□□ 0.83
LDLRAP1Q5SW96 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LDLRAP1Q5SW96 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 ID1-201ENST00000376105 1233 ntBASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 CYP2T3P-201ENST00000601990 817 ntBASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.26■□□□□ 0.83
LDLRAP1Q5SW96 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms