Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.12■□□□□ 0.97
IRX4P78413 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.12■□□□□ 0.97
IRX4P78413 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.12■□□□□ 0.97
IRX4P78413 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.12■□□□□ 0.97
IRX4P78413 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
IRX4P78413 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
IRX4P78413 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
IRX4P78413 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.12■□□□□ 0.97
IRX4P78413 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
IRX4P78413 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.12■□□□□ 0.97
IRX4P78413 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IRX4P78413 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IRX4P78413 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IRX4P78413 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
IRX4P78413 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IRX4P78413 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IRX4P78413 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IRX4P78413 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.11■□□□□ 0.97
IRX4P78413 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
IRX4P78413 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
IRX4P78413 RARRES2P4-201ENST00000514074 484 ntBASIC21.11■□□□□ 0.97
IRX4P78413 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
IRX4P78413 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.11■□□□□ 0.97
IRX4P78413 OR10C1-204ENST00000622521 1039 ntBASIC21.11■□□□□ 0.97
IRX4P78413 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
IRX4P78413 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
IRX4P78413 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
IRX4P78413 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IRX4P78413 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
IRX4P78413 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IRX4P78413 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IRX4P78413 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.1■□□□□ 0.97
IRX4P78413 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.1■□□□□ 0.97
IRX4P78413 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IRX4P78413 AC093787.1-201ENST00000450396 207 ntBASIC21.1■□□□□ 0.97
IRX4P78413 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
IRX4P78413 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
IRX4P78413 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.1■□□□□ 0.97
IRX4P78413 AC092118.2-201ENST00000613495 667 ntBASIC21.1■□□□□ 0.97
IRX4P78413 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IRX4P78413 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IRX4P78413 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IRX4P78413 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
IRX4P78413 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IRX4P78413 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX4P78413 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.09■□□□□ 0.97
IRX4P78413 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IRX4P78413 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX4P78413 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.09■□□□□ 0.97
IRX4P78413 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX4P78413 ESRRAP1-201ENST00000400596 1257 ntBASIC21.09■□□□□ 0.97
IRX4P78413 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
IRX4P78413 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
IRX4P78413 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IRX4P78413 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.09■□□□□ 0.97
IRX4P78413 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.09■□□□□ 0.97
IRX4P78413 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.09■□□□□ 0.97
IRX4P78413 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.09■□□□□ 0.97
IRX4P78413 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IRX4P78413 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.09■□□□□ 0.97
IRX4P78413 AC092667.1-201ENST00000434301 2586 ntBASIC21.09■□□□□ 0.97
IRX4P78413 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX4P78413 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IRX4P78413 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX4P78413 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IRX4P78413 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
IRX4P78413 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IRX4P78413 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
IRX4P78413 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.08■□□□□ 0.97
IRX4P78413 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IRX4P78413 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.08■□□□□ 0.97
IRX4P78413 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IRX4P78413 AL512625.2-201ENST00000417533 625 ntBASIC21.08■□□□□ 0.97
IRX4P78413 GCSHP5-201ENST00000443090 522 ntBASIC21.08■□□□□ 0.97
IRX4P78413 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.08■□□□□ 0.97
IRX4P78413 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.08■□□□□ 0.97
IRX4P78413 AC016405.3-201ENST00000607710 860 ntBASIC21.08■□□□□ 0.97
IRX4P78413 AC008694.1-202ENST00000636953 945 ntBASIC21.08■□□□□ 0.97
IRX4P78413 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IRX4P78413 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IRX4P78413 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IRX4P78413 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
IRX4P78413 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
IRX4P78413 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IRX4P78413 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
IRX4P78413 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
IRX4P78413 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX4P78413 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.07■□□□□ 0.96
IRX4P78413 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IRX4P78413 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.07■□□□□ 0.96
IRX4P78413 BX276092.2-201ENST00000417668 665 ntBASIC21.07■□□□□ 0.96
IRX4P78413 AC007322.4-201ENST00000509611 723 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms