Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DEFA3P59666 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
DEFA3P59666 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DEFA3P59666 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DEFA3P59666 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DEFA3P59666 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
DEFA3P59666 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.94■□□□□ 0.46
DEFA3P59666 AC020916.1-201ENST00000587762 1774 ntBASIC17.94■□□□□ 0.46
DEFA3P59666 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
DEFA3P59666 HTR7P1-202ENST00000624664 4411 ntBASIC17.94■□□□□ 0.46
DEFA3P59666 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
DEFA3P59666 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DEFA3P59666 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DEFA3P59666 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.94■□□□□ 0.46
DEFA3P59666 LONRF2P2-201ENST00000439212 571 ntBASIC17.94■□□□□ 0.46
DEFA3P59666 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DEFA3P59666 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DEFA3P59666 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DEFA3P59666 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DEFA3P59666 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DEFA3P59666 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DEFA3P59666 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
DEFA3P59666 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
DEFA3P59666 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
DEFA3P59666 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
DEFA3P59666 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DEFA3P59666 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DEFA3P59666 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
DEFA3P59666 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DEFA3P59666 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.93■□□□□ 0.46
DEFA3P59666 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
DEFA3P59666 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DEFA3P59666 AC125437.2-201ENST00000625180 2167 ntBASIC17.93■□□□□ 0.46
DEFA3P59666 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DEFA3P59666 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
DEFA3P59666 FP700111.2-201ENST00000619190 1892 ntBASIC17.93■□□□□ 0.46
DEFA3P59666 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.93■□□□□ 0.46
DEFA3P59666 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.93■□□□□ 0.46
DEFA3P59666 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.93■□□□□ 0.46
DEFA3P59666 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DEFA3P59666 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.93■□□□□ 0.46
DEFA3P59666 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DEFA3P59666 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DEFA3P59666 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DEFA3P59666 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DEFA3P59666 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DEFA3P59666 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 AF131216.4-201ENST00000638924 1588 ntBASIC17.92■□□□□ 0.46
DEFA3P59666 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.92■□□□□ 0.46
DEFA3P59666 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.92■□□□□ 0.46
DEFA3P59666 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DEFA3P59666 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.92■□□□□ 0.46
DEFA3P59666 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.92■□□□□ 0.46
DEFA3P59666 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.92■□□□□ 0.46
DEFA3P59666 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.92■□□□□ 0.46
DEFA3P59666 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
DEFA3P59666 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DEFA3P59666 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
DEFA3P59666 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DEFA3P59666 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DEFA3P59666 PKD1P1-201ENST00000458669 6805 ntBASIC17.92■□□□□ 0.46
DEFA3P59666 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
DEFA3P59666 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
DEFA3P59666 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.91■□□□□ 0.46
DEFA3P59666 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.91■□□□□ 0.46
DEFA3P59666 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
DEFA3P59666 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DEFA3P59666 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms