Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AC243732.1-201ENST00000612648 864 ntBASIC16.92■□□□□ 0.3
RIPPLY3P57055 AC010947.1-201ENST00000623454 693 ntBASIC16.92■□□□□ 0.3
RIPPLY3P57055 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPPLY3P57055 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
RIPPLY3P57055 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RIPPLY3P57055 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPPLY3P57055 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.92■□□□□ 0.3
RIPPLY3P57055 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPPLY3P57055 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.91■□□□□ 0.3
RIPPLY3P57055 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.91■□□□□ 0.3
RIPPLY3P57055 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.91■□□□□ 0.3
RIPPLY3P57055 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.91■□□□□ 0.3
RIPPLY3P57055 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.91■□□□□ 0.3
RIPPLY3P57055 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.91■□□□□ 0.3
RIPPLY3P57055 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.91■□□□□ 0.3
RIPPLY3P57055 AF186192.3-201ENST00000583427 947 ntBASIC16.91■□□□□ 0.3
RIPPLY3P57055 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.91■□□□□ 0.3
RIPPLY3P57055 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RIPPLY3P57055 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.91■□□□□ 0.3
RIPPLY3P57055 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPPLY3P57055 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RIPPLY3P57055 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.9■□□□□ 0.3
RIPPLY3P57055 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.89■□□□□ 0.3
RIPPLY3P57055 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
RIPPLY3P57055 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.89■□□□□ 0.29
RIPPLY3P57055 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.89■□□□□ 0.29
RIPPLY3P57055 AL022342.1-201ENST00000400363 863 ntBASIC16.89■□□□□ 0.29
RIPPLY3P57055 FAM8A6P-201ENST00000407496 1135 ntBASIC16.89■□□□□ 0.29
RIPPLY3P57055 PCED1CP-201ENST00000419887 785 ntBASIC16.89■□□□□ 0.29
RIPPLY3P57055 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.89■□□□□ 0.29
RIPPLY3P57055 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RIPPLY3P57055 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RIPPLY3P57055 IER3-202ENST00000376377 1350 ntBASIC16.89■□□□□ 0.29
RIPPLY3P57055 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RIPPLY3P57055 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 CYP2D8P-201ENST00000433633 1490 ntBASIC16.88■□□□□ 0.29
RIPPLY3P57055 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.88■□□□□ 0.29
RIPPLY3P57055 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.88■□□□□ 0.29
RIPPLY3P57055 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.88■□□□□ 0.29
RIPPLY3P57055 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.88■□□□□ 0.29
RIPPLY3P57055 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RIPPLY3P57055 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.88■□□□□ 0.29
RIPPLY3P57055 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RIPPLY3P57055 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RIPPLY3P57055 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RIPPLY3P57055 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RIPPLY3P57055 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RIPPLY3P57055 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms