Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.22■□□□□ 0.03
CMC4P56277 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CMC4P56277 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.22■□□□□ 0.03
CMC4P56277 AL356652.1-201ENST00000615962 565 ntBASIC15.22■□□□□ 0.03
CMC4P56277 AL050303.2-201ENST00000619798 666 ntBASIC15.22■□□□□ 0.03
CMC4P56277 AC133041.1-202ENST00000642053 222 ntBASIC15.22■□□□□ 0.03
CMC4P56277 AC026310.3-201ENST00000625186 2373 ntBASIC15.22■□□□□ 0.03
CMC4P56277 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.22■□□□□ 0.03
CMC4P56277 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMC4P56277 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.22■□□□□ 0.03
CMC4P56277 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.22■□□□□ 0.03
CMC4P56277 AC006128.1-201ENST00000624704 1661 ntBASIC15.22■□□□□ 0.03
CMC4P56277 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CMC4P56277 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.22■□□□□ 0.03
CMC4P56277 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CMC4P56277 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CMC4P56277 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CMC4P56277 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CMC4P56277 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.21■□□□□ 0.03
CMC4P56277 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CMC4P56277 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMC4P56277 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.21■□□□□ 0.03
CMC4P56277 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMC4P56277 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CMC4P56277 AC073210.2-201ENST00000430369 194 ntBASIC15.21■□□□□ 0.03
CMC4P56277 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.21■□□□□ 0.03
CMC4P56277 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.21■□□□□ 0.03
CMC4P56277 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CMC4P56277 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.21■□□□□ 0.03
CMC4P56277 AL138781.1-201ENST00000566567 1274 ntBASIC15.21■□□□□ 0.03
CMC4P56277 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMC4P56277 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.21■□□□□ 0.03
CMC4P56277 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.21■□□□□ 0.03
CMC4P56277 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.21■□□□□ 0.03
CMC4P56277 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.21■□□□□ 0.03
CMC4P56277 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMC4P56277 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.21■□□□□ 0.03
CMC4P56277 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CMC4P56277 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CMC4P56277 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CMC4P56277 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.21■□□□□ 0.02
CMC4P56277 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.21■□□□□ 0.02
CMC4P56277 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CMC4P56277 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.2■□□□□ 0.02
CMC4P56277 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CMC4P56277 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CMC4P56277 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CMC4P56277 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CMC4P56277 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.2■□□□□ 0.02
CMC4P56277 BX276092.2-201ENST00000417668 665 ntBASIC15.2■□□□□ 0.02
CMC4P56277 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.2■□□□□ 0.02
CMC4P56277 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.2■□□□□ 0.02
CMC4P56277 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.2■□□□□ 0.02
CMC4P56277 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.2■□□□□ 0.02
CMC4P56277 AC092118.2-201ENST00000613495 667 ntBASIC15.2■□□□□ 0.02
CMC4P56277 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC15.2■□□□□ 0.02
CMC4P56277 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.2■□□□□ 0.02
CMC4P56277 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.2■□□□□ 0.02
CMC4P56277 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CMC4P56277 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.19■□□□□ 0.02
CMC4P56277 AC138932.1-201ENST00000534164 6830 ntBASIC15.19■□□□□ 0.02
CMC4P56277 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CMC4P56277 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.19■□□□□ 0.02
CMC4P56277 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.19■□□□□ 0.02
CMC4P56277 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CMC4P56277 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.19■□□□□ 0.02
CMC4P56277 MIPEPP3-201ENST00000412105 444 ntBASIC15.19■□□□□ 0.02
CMC4P56277 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.19■□□□□ 0.02
CMC4P56277 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.19■□□□□ 0.02
CMC4P56277 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
CMC4P56277 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.19■□□□□ 0.02
CMC4P56277 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.19■□□□□ 0.02
CMC4P56277 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.19■□□□□ 0.02
CMC4P56277 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CMC4P56277 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.19■□□□□ 0.02
CMC4P56277 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CMC4P56277 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CMC4P56277 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CMC4P56277 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.19■□□□□ 0.02
CMC4P56277 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms