Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.48■□□□□ 0.87
NUBP1P53384 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.48■□□□□ 0.87
NUBP1P53384 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.48■□□□□ 0.87
NUBP1P53384 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.47■□□□□ 0.87
NUBP1P53384 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUBP1P53384 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NUBP1P53384 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUBP1P53384 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUBP1P53384 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.47■□□□□ 0.87
NUBP1P53384 AK4P3-201ENST00000418260 669 ntBASIC20.47■□□□□ 0.87
NUBP1P53384 AL450487.1-201ENST00000426799 995 ntBASIC20.47■□□□□ 0.87
NUBP1P53384 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NUBP1P53384 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUBP1P53384 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.47■□□□□ 0.87
NUBP1P53384 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NUBP1P53384 C2orf69P3-201ENST00000565542 1120 ntBASIC20.47■□□□□ 0.87
NUBP1P53384 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.47■□□□□ 0.87
NUBP1P53384 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
NUBP1P53384 AP000550.4-202ENST00000639755 178 ntBASIC20.47■□□□□ 0.87
NUBP1P53384 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NUBP1P53384 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NUBP1P53384 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.47■□□□□ 0.87
NUBP1P53384 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NUBP1P53384 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.47■□□□□ 0.87
NUBP1P53384 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.47■□□□□ 0.87
NUBP1P53384 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NUBP1P53384 AC137767.1-201ENST00000602918 1920 ntBASIC20.47■□□□□ 0.87
NUBP1P53384 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUBP1P53384 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NUBP1P53384 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUBP1P53384 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.46■□□□□ 0.87
NUBP1P53384 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.46■□□□□ 0.87
NUBP1P53384 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NUBP1P53384 AL390955.1-201ENST00000428694 934 ntBASIC20.46■□□□□ 0.87
NUBP1P53384 KSR1P1-201ENST00000446298 240 ntBASIC20.46■□□□□ 0.87
NUBP1P53384 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.46■□□□□ 0.87
NUBP1P53384 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.46■□□□□ 0.87
NUBP1P53384 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.46■□□□□ 0.87
NUBP1P53384 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NUBP1P53384 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.46■□□□□ 0.87
NUBP1P53384 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUBP1P53384 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.46■□□□□ 0.87
NUBP1P53384 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUBP1P53384 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NUBP1P53384 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NUBP1P53384 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.45■□□□□ 0.86
NUBP1P53384 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.45■□□□□ 0.86
NUBP1P53384 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUBP1P53384 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUBP1P53384 FAM8A6P-201ENST00000407496 1135 ntBASIC20.45■□□□□ 0.86
NUBP1P53384 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
NUBP1P53384 EGLN1P1-201ENST00000531623 762 ntBASIC20.45■□□□□ 0.86
NUBP1P53384 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.45■□□□□ 0.86
NUBP1P53384 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC20.45■□□□□ 0.86
NUBP1P53384 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.45■□□□□ 0.86
NUBP1P53384 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.45■□□□□ 0.86
NUBP1P53384 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
NUBP1P53384 MYC-208ENST00000641036 567 ntBASIC20.45■□□□□ 0.86
NUBP1P53384 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NUBP1P53384 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NUBP1P53384 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.45■□□□□ 0.86
NUBP1P53384 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUBP1P53384 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.45■□□□□ 0.86
NUBP1P53384 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NUBP1P53384 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUBP1P53384 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.44■□□□□ 0.86
NUBP1P53384 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.44■□□□□ 0.86
NUBP1P53384 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.44■□□□□ 0.86
NUBP1P53384 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.44■□□□□ 0.86
NUBP1P53384 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
NUBP1P53384 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.44■□□□□ 0.86
NUBP1P53384 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC20.44■□□□□ 0.86
NUBP1P53384 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.44■□□□□ 0.86
NUBP1P53384 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.44■□□□□ 0.86
NUBP1P53384 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.44■□□□□ 0.86
NUBP1P53384 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NUBP1P53384 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
NUBP1P53384 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.44■□□□□ 0.86
NUBP1P53384 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUBP1P53384 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NUBP1P53384 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.43■□□□□ 0.86
NUBP1P53384 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUBP1P53384 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.43■□□□□ 0.86
NUBP1P53384 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.43■□□□□ 0.86
NUBP1P53384 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NUBP1P53384 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms