Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CDR1P51861 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CDR1P51861 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CDR1P51861 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.23■■□□□ 1.15
CDR1P51861 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
CDR1P51861 AC013268.1-206ENST00000638368 961 ntBASIC22.23■■□□□ 1.15
CDR1P51861 AC112229.1-201ENST00000639295 961 ntBASIC22.23■■□□□ 1.15
CDR1P51861 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CDR1P51861 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CDR1P51861 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDR1P51861 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDR1P51861 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
CDR1P51861 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDR1P51861 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CDR1P51861 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDR1P51861 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDR1P51861 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDR1P51861 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.22■■□□□ 1.15
CDR1P51861 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.22■■□□□ 1.15
CDR1P51861 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDR1P51861 RBM17P2-201ENST00000616397 1405 ntBASIC22.22■■□□□ 1.15
CDR1P51861 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDR1P51861 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDR1P51861 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
CDR1P51861 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.21■■□□□ 1.15
CDR1P51861 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDR1P51861 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.21■■□□□ 1.15
CDR1P51861 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.21■■□□□ 1.15
CDR1P51861 AF201337.1-201ENST00000520239 748 ntBASIC22.21■■□□□ 1.15
CDR1P51861 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.21■■□□□ 1.15
CDR1P51861 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.21■■□□□ 1.15
CDR1P51861 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDR1P51861 AC244015.2-201ENST00000616358 1861 ntBASIC22.21■■□□□ 1.15
CDR1P51861 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CDR1P51861 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDR1P51861 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.21■■□□□ 1.15
CDR1P51861 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDR1P51861 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDR1P51861 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDR1P51861 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDR1P51861 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDR1P51861 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC22.2■■□□□ 1.14
CDR1P51861 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.2■■□□□ 1.14
CDR1P51861 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.2■■□□□ 1.14
CDR1P51861 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.2■■□□□ 1.14
CDR1P51861 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDR1P51861 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.2■■□□□ 1.14
CDR1P51861 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDR1P51861 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDR1P51861 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDR1P51861 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDR1P51861 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CDR1P51861 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.2■■□□□ 1.14
CDR1P51861 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.19■■□□□ 1.14
CDR1P51861 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDR1P51861 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.19■■□□□ 1.14
CDR1P51861 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.19■■□□□ 1.14
CDR1P51861 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.19■■□□□ 1.14
CDR1P51861 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.19■■□□□ 1.14
CDR1P51861 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.19■■□□□ 1.14
CDR1P51861 SLC7A5P1-201ENST00000568957 537 ntBASIC22.19■■□□□ 1.14
CDR1P51861 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.19■■□□□ 1.14
CDR1P51861 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.19■■□□□ 1.14
CDR1P51861 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CDR1P51861 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDR1P51861 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDR1P51861 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.19■■□□□ 1.14
CDR1P51861 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
CDR1P51861 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDR1P51861 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDR1P51861 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDR1P51861 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.19■■□□□ 1.14
CDR1P51861 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDR1P51861 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CDR1P51861 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDR1P51861 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDR1P51861 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDR1P51861 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDR1P51861 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDR1P51861 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDR1P51861 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
CDR1P51861 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDR1P51861 KRT16P2-201ENST00000414673 1423 ntBASIC22.18■■□□□ 1.14
CDR1P51861 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.18■■□□□ 1.14
CDR1P51861 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
CDR1P51861 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CDR1P51861 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.18■■□□□ 1.14
CDR1P51861 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms