Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX6P35712 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX6P35712 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX6P35712 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX6P35712 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.27■□□□□ 0.52
SOX6P35712 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX6P35712 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.27■□□□□ 0.52
SOX6P35712 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX6P35712 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX6P35712 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.27■□□□□ 0.52
SOX6P35712 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX6P35712 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SOX6P35712 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SOX6P35712 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SOX6P35712 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SOX6P35712 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.26■□□□□ 0.51
SOX6P35712 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.26■□□□□ 0.51
SOX6P35712 AC026471.1-201ENST00000564629 3026 ntBASIC18.26■□□□□ 0.51
SOX6P35712 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.26■□□□□ 0.51
SOX6P35712 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SOX6P35712 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SOX6P35712 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SOX6P35712 AC092028.1-203ENST00000608262 953 ntBASIC18.26■□□□□ 0.51
SOX6P35712 AC087239.1-201ENST00000622671 572 ntBASIC18.26■□□□□ 0.51
SOX6P35712 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SOX6P35712 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.26■□□□□ 0.51
SOX6P35712 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX6P35712 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.26■□□□□ 0.51
SOX6P35712 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SOX6P35712 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.25■□□□□ 0.51
SOX6P35712 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.25■□□□□ 0.51
SOX6P35712 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.25■□□□□ 0.51
SOX6P35712 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.25■□□□□ 0.51
SOX6P35712 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.25■□□□□ 0.51
SOX6P35712 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.25■□□□□ 0.51
SOX6P35712 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.25■□□□□ 0.51
SOX6P35712 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SOX6P35712 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SOX6P35712 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.24■□□□□ 0.51
SOX6P35712 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
SOX6P35712 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.24■□□□□ 0.51
SOX6P35712 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SOX6P35712 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.24■□□□□ 0.51
SOX6P35712 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.24■□□□□ 0.51
SOX6P35712 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
SOX6P35712 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SOX6P35712 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.24■□□□□ 0.51
SOX6P35712 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SOX6P35712 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.24■□□□□ 0.51
SOX6P35712 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SOX6P35712 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.24■□□□□ 0.51
SOX6P35712 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SOX6P35712 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms