Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
H2AFXP16104 AC020916.1-201ENST00000587762 1774 ntBASIC21.26■□□□□ 0.99
H2AFXP16104 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2AFXP16104 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.26■□□□□ 0.99
H2AFXP16104 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.26■□□□□ 0.99
H2AFXP16104 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.26■□□□□ 0.99
H2AFXP16104 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.26■□□□□ 0.99
H2AFXP16104 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.26■□□□□ 0.99
H2AFXP16104 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
H2AFXP16104 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
H2AFXP16104 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.26■□□□□ 0.99
H2AFXP16104 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
H2AFXP16104 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2AFXP16104 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2AFXP16104 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2AFXP16104 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2AFXP16104 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2AFXP16104 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2AFXP16104 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2AFXP16104 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2AFXP16104 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2AFXP16104 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.25■□□□□ 0.99
H2AFXP16104 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.25■□□□□ 0.99
H2AFXP16104 AL691432.2-201ENST00000607222 2038 ntBASIC21.25■□□□□ 0.99
H2AFXP16104 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2AFXP16104 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
H2AFXP16104 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
H2AFXP16104 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
H2AFXP16104 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
H2AFXP16104 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.24■□□□□ 0.99
H2AFXP16104 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.24■□□□□ 0.99
H2AFXP16104 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.24■□□□□ 0.99
H2AFXP16104 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.24■□□□□ 0.99
H2AFXP16104 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.24■□□□□ 0.99
H2AFXP16104 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.24■□□□□ 0.99
H2AFXP16104 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
H2AFXP16104 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.24■□□□□ 0.99
H2AFXP16104 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2AFXP16104 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2AFXP16104 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
H2AFXP16104 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
H2AFXP16104 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2AFXP16104 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2AFXP16104 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
H2AFXP16104 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.23■□□□□ 0.99
H2AFXP16104 DUX4L18-201ENST00000553347 1267 ntBASIC21.23■□□□□ 0.99
H2AFXP16104 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
H2AFXP16104 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
H2AFXP16104 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2AFXP16104 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.23■□□□□ 0.99
H2AFXP16104 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2AFXP16104 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2AFXP16104 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.23■□□□□ 0.99
H2AFXP16104 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
H2AFXP16104 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2AFXP16104 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.22■□□□□ 0.99
H2AFXP16104 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2AFXP16104 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.22■□□□□ 0.99
H2AFXP16104 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2AFXP16104 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.22■□□□□ 0.99
H2AFXP16104 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2AFXP16104 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2AFXP16104 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.22■□□□□ 0.99
H2AFXP16104 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2AFXP16104 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
H2AFXP16104 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2AFXP16104 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2AFXP16104 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2AFXP16104 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
H2AFXP16104 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
H2AFXP16104 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H2AFXP16104 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H2AFXP16104 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.21■□□□□ 0.99
H2AFXP16104 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.21■□□□□ 0.99
H2AFXP16104 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
H2AFXP16104 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
H2AFXP16104 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
H2AFXP16104 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
H2AFXP16104 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.21■□□□□ 0.99
H2AFXP16104 AC079598.2-202ENST00000546624 1451 ntBASIC21.2■□□□□ 0.98
H2AFXP16104 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
H2AFXP16104 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H2AFXP16104 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.2■□□□□ 0.98
H2AFXP16104 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
H2AFXP16104 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H2AFXP16104 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.2■□□□□ 0.98
H2AFXP16104 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
H2AFXP16104 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms