Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.31■□□□□ 0.52
HLA-DPB1P04440 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.3■□□□□ 0.52
HLA-DPB1P04440 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 BX005040.4-201ENST00000637145 1518 ntBASIC18.29■□□□□ 0.52
HLA-DPB1P04440 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 AL354811.1-201ENST00000610286 706 ntBASIC18.29■□□□□ 0.52
HLA-DPB1P04440 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DPB1P04440 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DPB1P04440 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HLA-DPB1P04440 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.28■□□□□ 0.52
HLA-DPB1P04440 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DPB1P04440 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DPB1P04440 AL358852.1-201ENST00000623174 1268 ntBASIC18.28■□□□□ 0.52
HLA-DPB1P04440 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DPB1P04440 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DPB1P04440 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DPB1P04440 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DPB1P04440 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DPB1P04440 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DPB1P04440 AL020996.1-203ENST00000536896 2307 ntBASIC18.27■□□□□ 0.52
HLA-DPB1P04440 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DPB1P04440 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DPB1P04440 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.27■□□□□ 0.52
HLA-DPB1P04440 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HLA-DPB1P04440 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-DPB1P04440 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DPB1P04440 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DPB1P04440 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DPB1P04440 AC018445.3-201ENST00000624177 1945 ntBASIC18.27■□□□□ 0.51
HLA-DPB1P04440 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
HLA-DPB1P04440 BX323043.1-201ENST00000641006 1765 ntBASIC18.27■□□□□ 0.51
HLA-DPB1P04440 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DPB1P04440 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
HLA-DPB1P04440 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DPB1P04440 AC019069.1-201ENST00000610008 1333 ntBASIC18.25■□□□□ 0.51
HLA-DPB1P04440 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPB1P04440 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPB1P04440 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPB1P04440 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DPB1P04440 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DPB1P04440 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HLA-DPB1P04440 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms