Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.83■□□□□ 0.44
LCATP04180 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCATP04180 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LCATP04180 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.83■□□□□ 0.44
LCATP04180 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCATP04180 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.82■□□□□ 0.44
LCATP04180 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LCATP04180 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.82■□□□□ 0.44
LCATP04180 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.82■□□□□ 0.44
LCATP04180 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 AC027702.1-201ENST00000563810 1770 ntBASIC17.82■□□□□ 0.44
LCATP04180 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LCATP04180 AC007322.3-201ENST00000426526 701 ntBASIC17.82■□□□□ 0.44
LCATP04180 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LCATP04180 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.82■□□□□ 0.44
LCATP04180 CDV3P1-201ENST00000471403 739 ntBASIC17.82■□□□□ 0.44
LCATP04180 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.82■□□□□ 0.44
LCATP04180 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LCATP04180 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LCATP04180 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LCATP04180 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.82■□□□□ 0.44
LCATP04180 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LCATP04180 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LCATP04180 AC073314.1-201ENST00000568729 2216 ntBASIC17.82■□□□□ 0.44
LCATP04180 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCATP04180 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCATP04180 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.81■□□□□ 0.44
LCATP04180 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.81■□□□□ 0.44
LCATP04180 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCATP04180 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.81■□□□□ 0.44
LCATP04180 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCATP04180 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCATP04180 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
LCATP04180 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LCATP04180 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCATP04180 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.81■□□□□ 0.44
LCATP04180 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LCATP04180 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.81■□□□□ 0.44
LCATP04180 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.81■□□□□ 0.44
LCATP04180 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LCATP04180 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.81■□□□□ 0.44
LCATP04180 AC010536.3-201ENST00000620306 533 ntBASIC17.81■□□□□ 0.44
LCATP04180 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LCATP04180 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LCATP04180 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCATP04180 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
LCATP04180 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.81■□□□□ 0.44
LCATP04180 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCATP04180 AC092667.1-201ENST00000434301 2586 ntBASIC17.81■□□□□ 0.44
LCATP04180 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
LCATP04180 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LCATP04180 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.8■□□□□ 0.44
LCATP04180 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LCATP04180 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCATP04180 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCATP04180 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCATP04180 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCATP04180 TERF1P5-201ENST00000477545 1207 ntBASIC17.8■□□□□ 0.44
LCATP04180 AL162430.1-201ENST00000480705 870 ntBASIC17.8■□□□□ 0.44
LCATP04180 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LCATP04180 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LCATP04180 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LCATP04180 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.8■□□□□ 0.44
LCATP04180 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCATP04180 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCATP04180 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.8■□□□□ 0.44
LCATP04180 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.8■□□□□ 0.44
LCATP04180 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.79■□□□□ 0.44
LCATP04180 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 AP005212.1-201ENST00000581547 1997 ntBASIC17.79■□□□□ 0.44
LCATP04180 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.79■□□□□ 0.44
LCATP04180 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LCATP04180 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LCATP04180 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.79■□□□□ 0.44
LCATP04180 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.79■□□□□ 0.44
LCATP04180 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms