Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.22■□□□□ 0.67
MT-ND1P03886 AC027682.1-201ENST00000562846 899 ntBASIC19.22■□□□□ 0.67
MT-ND1P03886 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-ND1P03886 AC106739.1-201ENST00000617035 715 ntBASIC19.22■□□□□ 0.67
MT-ND1P03886 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.22■□□□□ 0.67
MT-ND1P03886 AL158211.5-201ENST00000623583 2518 ntBASIC19.22■□□□□ 0.67
MT-ND1P03886 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MT-ND1P03886 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.22■□□□□ 0.67
MT-ND1P03886 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND1P03886 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND1P03886 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MT-ND1P03886 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-ND1P03886 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
MT-ND1P03886 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.21■□□□□ 0.67
MT-ND1P03886 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.21■□□□□ 0.67
MT-ND1P03886 AC098818.2-201ENST00000564925 2320 ntBASIC19.21■□□□□ 0.67
MT-ND1P03886 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-ND1P03886 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MT-ND1P03886 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.21■□□□□ 0.67
MT-ND1P03886 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-ND1P03886 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-ND1P03886 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-ND1P03886 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MT-ND1P03886 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.21■□□□□ 0.67
MT-ND1P03886 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
MT-ND1P03886 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.2■□□□□ 0.66
MT-ND1P03886 AC055733.4-201ENST00000638462 1354 ntBASIC19.2■□□□□ 0.66
MT-ND1P03886 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.2■□□□□ 0.66
MT-ND1P03886 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND1P03886 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND1P03886 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
MT-ND1P03886 AC009237.3-201ENST00000393279 1427 ntBASIC19.2■□□□□ 0.66
MT-ND1P03886 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.2■□□□□ 0.66
MT-ND1P03886 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.2■□□□□ 0.66
MT-ND1P03886 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND1P03886 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
MT-ND1P03886 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.2■□□□□ 0.66
MT-ND1P03886 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.2■□□□□ 0.66
MT-ND1P03886 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MT-ND1P03886 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
MT-ND1P03886 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND1P03886 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND1P03886 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MT-ND1P03886 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MT-ND1P03886 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND1P03886 AC125437.2-201ENST00000625180 2167 ntBASIC19.19■□□□□ 0.66
MT-ND1P03886 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND1P03886 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.19■□□□□ 0.66
MT-ND1P03886 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND1P03886 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.19■□□□□ 0.66
MT-ND1P03886 EDA-201ENST00000338901 1233 ntBASIC19.19■□□□□ 0.66
MT-ND1P03886 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-ND1P03886 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.19■□□□□ 0.66
MT-ND1P03886 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-ND1P03886 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND1P03886 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND1P03886 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND1P03886 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.19■□□□□ 0.66
MT-ND1P03886 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND1P03886 AC011484.1-201ENST00000377652 1995 ntBASIC19.19■□□□□ 0.66
MT-ND1P03886 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MT-ND1P03886 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MT-ND1P03886 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.18■□□□□ 0.66
MT-ND1P03886 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
MT-ND1P03886 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
MT-ND1P03886 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
MT-ND1P03886 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.18■□□□□ 0.66
MT-ND1P03886 TSPY26P-201ENST00000476365 1326 ntBASIC19.18■□□□□ 0.66
MT-ND1P03886 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MT-ND1P03886 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.17■□□□□ 0.66
MT-ND1P03886 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND1P03886 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND1P03886 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND1P03886 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND1P03886 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND1P03886 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND1P03886 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms