Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
GADD45BO75293 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
GADD45BO75293 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
GADD45BO75293 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
GADD45BO75293 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.37■■□□□ 1.33
GADD45BO75293 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.37■■□□□ 1.33
GADD45BO75293 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
GADD45BO75293 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.37■■□□□ 1.33
GADD45BO75293 PBX2P1-201ENST00000493219 1291 ntBASIC23.37■■□□□ 1.33
GADD45BO75293 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.37■■□□□ 1.33
GADD45BO75293 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.37■■□□□ 1.33
GADD45BO75293 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.37■■□□□ 1.33
GADD45BO75293 MIR2861-201ENST00000636310 90 ntBASIC23.37■■□□□ 1.33
GADD45BO75293 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
GADD45BO75293 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.37■■□□□ 1.33
GADD45BO75293 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.37■■□□□ 1.33
GADD45BO75293 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
GADD45BO75293 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
GADD45BO75293 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
GADD45BO75293 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
GADD45BO75293 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
GADD45BO75293 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.37■■□□□ 1.33
GADD45BO75293 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
GADD45BO75293 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
GADD45BO75293 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
GADD45BO75293 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
GADD45BO75293 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.36■■□□□ 1.33
GADD45BO75293 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.36■■□□□ 1.33
GADD45BO75293 AC012414.1-201ENST00000556676 535 ntBASIC23.36■■□□□ 1.33
GADD45BO75293 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
GADD45BO75293 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
GADD45BO75293 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
GADD45BO75293 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
GADD45BO75293 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
GADD45BO75293 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
GADD45BO75293 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.36■■□□□ 1.33
GADD45BO75293 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GADD45BO75293 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
GADD45BO75293 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
GADD45BO75293 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
GADD45BO75293 AC096631.2-201ENST00000436136 790 ntBASIC23.35■■□□□ 1.33
GADD45BO75293 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.35■■□□□ 1.33
GADD45BO75293 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.35■■□□□ 1.33
GADD45BO75293 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.35■■□□□ 1.33
GADD45BO75293 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.35■■□□□ 1.33
GADD45BO75293 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.35■■□□□ 1.33
GADD45BO75293 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
GADD45BO75293 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
GADD45BO75293 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.35■■□□□ 1.33
GADD45BO75293 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
GADD45BO75293 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GADD45BO75293 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
GADD45BO75293 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
GADD45BO75293 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
GADD45BO75293 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.34■■□□□ 1.33
GADD45BO75293 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
GADD45BO75293 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
GADD45BO75293 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.34■■□□□ 1.33
GADD45BO75293 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.34■■□□□ 1.33
GADD45BO75293 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.34■■□□□ 1.33
GADD45BO75293 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
GADD45BO75293 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
GADD45BO75293 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.34■■□□□ 1.33
GADD45BO75293 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
GADD45BO75293 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.34■■□□□ 1.33
GADD45BO75293 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
GADD45BO75293 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
GADD45BO75293 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
GADD45BO75293 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.33■■□□□ 1.33
GADD45BO75293 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GADD45BO75293 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.33■■□□□ 1.33
GADD45BO75293 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
GADD45BO75293 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GADD45BO75293 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
GADD45BO75293 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.33■■□□□ 1.33
GADD45BO75293 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.33■■□□□ 1.33
GADD45BO75293 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GADD45BO75293 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
GADD45BO75293 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
GADD45BO75293 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.33■■□□□ 1.32
GADD45BO75293 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GADD45BO75293 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.32■■□□□ 1.32
GADD45BO75293 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GADD45BO75293 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
GADD45BO75293 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GADD45BO75293 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
GADD45BO75293 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.32■■□□□ 1.32
GADD45BO75293 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GADD45BO75293 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GADD45BO75293 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
GADD45BO75293 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GADD45BO75293 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.32■■□□□ 1.32
GADD45BO75293 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
GADD45BO75293 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.32■■□□□ 1.32
GADD45BO75293 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
GADD45BO75293 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
GADD45BO75293 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.31■■□□□ 1.32
GADD45BO75293 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
GADD45BO75293 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
GADD45BO75293 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms