Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TSPAN4O14817 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TSPAN4O14817 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TSPAN4O14817 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
TSPAN4O14817 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
TSPAN4O14817 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TSPAN4O14817 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.04■□□□□ 0.32
TSPAN4O14817 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 AC131212.1-201ENST00000613771 668 ntBASIC17.04■□□□□ 0.32
TSPAN4O14817 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.04■□□□□ 0.32
TSPAN4O14817 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TSPAN4O14817 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TSPAN4O14817 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TSPAN4O14817 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
TSPAN4O14817 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TSPAN4O14817 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TSPAN4O14817 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TSPAN4O14817 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.03■□□□□ 0.32
TSPAN4O14817 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TSPAN4O14817 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.03■□□□□ 0.32
TSPAN4O14817 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TSPAN4O14817 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.03■□□□□ 0.32
TSPAN4O14817 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.03■□□□□ 0.32
TSPAN4O14817 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.03■□□□□ 0.32
TSPAN4O14817 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.03■□□□□ 0.32
TSPAN4O14817 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.03■□□□□ 0.32
TSPAN4O14817 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.03■□□□□ 0.32
TSPAN4O14817 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
TSPAN4O14817 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TSPAN4O14817 AC012313.1-201ENST00000593393 3059 ntBASIC17.02■□□□□ 0.32
TSPAN4O14817 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TSPAN4O14817 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.02■□□□□ 0.32
TSPAN4O14817 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TSPAN4O14817 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.02■□□□□ 0.32
TSPAN4O14817 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TSPAN4O14817 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.02■□□□□ 0.32
TSPAN4O14817 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.02■□□□□ 0.32
TSPAN4O14817 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.02■□□□□ 0.32
TSPAN4O14817 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.02■□□□□ 0.32
TSPAN4O14817 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.02■□□□□ 0.32
TSPAN4O14817 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TSPAN4O14817 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TSPAN4O14817 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TSPAN4O14817 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TSPAN4O14817 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TSPAN4O14817 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.01■□□□□ 0.31
TSPAN4O14817 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TSPAN4O14817 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.01■□□□□ 0.31
TSPAN4O14817 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TSPAN4O14817 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.01■□□□□ 0.31
TSPAN4O14817 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.01■□□□□ 0.31
TSPAN4O14817 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.01■□□□□ 0.31
TSPAN4O14817 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.01■□□□□ 0.31
TSPAN4O14817 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.01■□□□□ 0.31
TSPAN4O14817 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.01■□□□□ 0.31
TSPAN4O14817 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.01■□□□□ 0.31
TSPAN4O14817 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.01■□□□□ 0.31
TSPAN4O14817 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.01■□□□□ 0.31
TSPAN4O14817 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TSPAN4O14817 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TSPAN4O14817 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TSPAN4O14817 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms