Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.64□□□□□ -0.23
LRCOL1A6NCL2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 ABHD17AP1-201ENST00000358206 933 ntBASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 MYC-209ENST00000641252 345 ntBASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRCOL1A6NCL2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 EP400NL-214ENST00000641289 2402 ntBASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 AC244015.2-201ENST00000616358 1861 ntBASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 AL355472.2-201ENST00000422958 438 ntBASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 AC091874.3-201ENST00000512672 1195 ntBASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 CYP2T3P-201ENST00000601990 817 ntBASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRCOL1A6NCL2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 AC116050.2-201ENST00000612102 1779 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms