Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 AC007613.1-201ENST00000572811 2597 ntBASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 AC004448.1-201ENST00000458332 883 ntBASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 ERF-202ENST00000440177 2032 ntTSL 2 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 AC004687.1-201ENST00000579003 1625 ntBASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRAV22A0A0B4J277 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 CR559946.2-201ENST00000623684 991 ntBASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 GAK-223ENST00000628912 497 ntTSL 5 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRAV22A0A0B4J277 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
TRAV22A0A0B4J277 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 DET1-207ENST00000564406 2315 ntTSL 2 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 PLK5-205ENST00000642079 1969 ntBASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TRAV22A0A0B4J277 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
TRAV22A0A0B4J277 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRAV22A0A0B4J277 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC11.57□□□□□ -0.56
TRAV22A0A0B4J277 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
TRAV22A0A0B4J277 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC11.57□□□□□ -0.56
TRAV22A0A0B4J277 NFIC-211ENST00000641145 8399 ntBASIC11.57□□□□□ -0.56
TRAV22A0A0B4J277 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TRAV22A0A0B4J277 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms